Scomber scombrus (Atlantic mackerel): 133990886
Help
Entry
133990886 CDS
T10651
Symbol
mtf2
Name
(RefSeq) metal-response element-binding transcription factor 2 isoform X1
KO
K11485
metal regulatory transcription factor 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133990886 (mtf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133990886 (mtf2)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133990886 (mtf2)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133990886 (mtf2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
133990886 (mtf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mtf2_C
PHD
Tudor_2
Prok-RING_1
ASH2L-like_WH
DUF4537
PHD_NSD
zf_RING_Vps8
SH3_TNRC18
SGF29_Tudor
PHDvar_NSD
Rad9_Rad53_bind
PHD_ash2p_like
Motif
Other DBs
NCBI-GeneID:
133990886
NCBI-ProteinID:
XP_062285287
LinkDB
All DBs
Position
11:10723557..10736558
Genome browser
AA seq
645 aa
AA seq
DB search
MPPLISFVMVNVCLSLFHHSPFSRFSRDSGVVDHLSVHQRAHPQRQQQALSLSHTSLSAR
VEYGEDDMSERFTEGQDVLARWSDGLFYLGTITKIDRDKQRCFVVFEDRSKSWVLWKDIQ
TGDEDEEDDEDDDIACSICQDETSDEPNEIVICDKCGQGYHQLCHSPIIDATVIDSDEKW
LCSECELTAISKRGSAHRRGVNAKAFLQQEHHQQHMELHLSLPYTLNELVWDQGHKTNIQ
QCYCYCGGPGDWYLKMLQCNRCQQWFHEACLHCLQMPMLYGDRFYLFICSVCNGGPEYVS
RLPLRWEDVTHLSLYNLSVIHKKKYFDSEMDLMTYINDKWEMLQLGELAKTPRSERYENV
LEALNNNSSMFMSGKEVKKKKHLFGLRIRFPPAPPNSDEPTSRVMERASHEITIKGCKSN
KALAGMRTCSTLTNGTEKKTKKKKRKQGTRSLEALAKPRRSSELLSQELRKPLPLESHSL
DHLTSIKSDRSLLSSRTSDVESIGALSTTETTSTSISRQSSLCSSSKTRTTACIMPVSPP
PLKRKRGRPRRALQPPNPEIPPPRHADPNPTATEMLSALPGLHSTDIVHGMDPNSQLSHL
KSSISSYFGAAGRLACGEKYKVLARRVTLDGKVQYLVEWEGVTAS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccacctctcatttcattcgttatggtaaatgtatgtctctcccttttccaccactcc
cctttctcccggttttccagagactcaggggttgtggatcacctgtctgtccatcagaga
gcccacccccagcggcagcagcaggctctttccttgtcccacacaagcctttctgctagg
gtggagtatggagaggacgacatgtctgaaaggttcacagagggacaggacgtcttggcc
cggtggtcagatggcttgttctacttggggacgatcacaaagatagatcgggacaagcag
cgatgctttgttgtttttgaagatcgctcaaagtcttgggttctctggaaggatattcag
acaggagatgaagatgaagaggatgatgaggacgatgacattgcatgctccatatgccag
gatgaaacttcagacgaacccaatgagatcgtcatatgtgacaagtgtggacaaggctac
catcagctatgccactccccaatcattgatgccaccgtcattgactccgatgaaaagtgg
ctttgctcagagtgtgagctcactgctatatctaagaggggcagtgcacataggagggga
gtgaatgctaaagcctttctgcaacaggagcatcatcagcaacacatggagctgcacctg
tccctcccatacaccctgaacgagctggtgtgggaccaaggccacaagactaacatccag
cagtgctactgctactgtggaggtccaggagactggtatctgaagatgctgcagtgtaac
aggtgtcagcagtggttccatgaggcttgtcttcattgcttacagatgcccatgctctat
ggagataggttttatctgtttatttgttccgtttgcaatggtggaccagagtatgtcagc
cgactgcctctcagatgggaggatgtcacacacctgagcctgtacaacttgagtgtgatc
cacaagaagaagtactttgactctgagatggacctgatgacttacatcaatgataaatgg
gagatgctgcagctgggggagcttgccaagactccaagatcagagcgatatgaaaatgtc
ctggaggcgttaaacaacaacagcagcatgtttatgtcaggaaaggaggtaaagaaaaag
aagcatctgtttgggctgaggatccgtttccctcctgctcctcccaactctgatgagcca
accagcagagtgatggagcgggcttcacatgagatcacgatcaagggatgcaagtctaac
aaagccctggcaggcatgagaacttgcagtactttaacgaatggcacagagaagaagaca
aagaagaaaaagaggaagcaaggaactcgctctctggaggccctggccaaaccacgacgc
tccagtgaacttttgtcccaggaactaagaaagcctctaccactagagtcccactccttg
gatcacttaacctccatcaagagtgacagatctttactgtcgtctcgaacctcagatgtg
gaatctataggagccctgagcaccacagaaactacctcaactagcatttcaagacagtcc
agcctctgtagctccagcaagactcgcaccacagcctgcatcatgcctgtttcccctcca
cccttaaaaaggaaacgtgggcggccacgacgggcgctgcagcccccaaacccggagatc
ccccctcccagacacgcagacccaaaccccactgccacagagatgctgagtgctctgccg
gggctgcactccacagacatagttcatggcatggaccccaacagtcagctctcccacctt
aagagctccatcagcagctatttcggagcagcagggaggcttgcttgtggggaaaagtac
aaagtcctggctcggcgggtgaccctggacggcaaggtccagtacctggtggaatgggaa
ggagtcaccgcctcctag
DBGET
integrated database retrieval system
