Scomber scombrus (Atlantic mackerel): 133990931
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Entry
133990931 CDS
T10651
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
ssco04520
Adherens junction
ssco04910
Insulin signaling pathway
Brite
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
133990931
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
133990931
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133990931
NCBI-ProteinID:
XP_062285339
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Position
11:20975060..21152806
Genome browser
AA seq
1899 aa
AA seq
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MVPNTHLAMPLLPRGALLFLLLLNCMGISSLADSLPSFVKSPEDQTGISGGVASFVCQAA
GEPKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEIN
TSAKLTVLEENQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDMLPVDI
SSSNGRIKQLRSGALQIENSEESDQGKYECVAMNSAGTRYSSPANLYVRVRRVPPRFSIP
PTNQEVMPGGSVNLTCVAVGSPMPYVKWMKGEVELTKEEEMPMGRNVLEVTNIRESANFT
CVAMSSLGMIQATAQVTVKALPKPPTSLIVTETTATSVTLTWDSGNPEPVSYYMIQYKAK
ASDNGFQEVEGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGEQAPSSPP
LHVQARMLSASTMLVQWEQPEEPNGQIRGYRVYYSSDLTAPLSAWQKHNTDDSSLTTISG
LTPDITYSLRVLGFTSVGDGPPSDILQVKTQQGVPAQPSSFEAEAELDTRIVLTWLWPVQ
DPITKYELQYWENGSDNKLHVSFNPAGSYAVDGLKPDTLYHFSLAARSEMGLGVYTQPIE
VRTAQSTPSAPPQEVHLVSLSSTSLKVSWVAPPAASRHGAIVRYTVSYQALTGEDTERHE
VAGIGAEATSYVLEGLEKWTEYQVWVRAHTDVGPGPESAPVRMRTKEDVPGAPPRKLEVE
AVNSTAIRVTWKPPLQVKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQEAIISGL
HSETTYSVTVAAYTTKGDGARSKAKVITTTGAVPGKPTMMISTTMGNTALIQWQPPKEMV
GELMGYQLQYKRTDDDAYISRELGKNEDHYTATGLHKGATYVFRLGARNRAGIGEAYVKE
INTPEDVPSGFPLNLQVTGLTQSSTQLTWEPPLLPERNGKIQYYVVVYRDINSQQNSTNR
TSDRHMTIQGLNPDTTYDIRVQAFTSKGGGPLSPSIQSRTMSNDFPTLNFGVKAVMKTSV
LLTWDLPPNYKPAVPFKILYNQQSVEVQGNLKRKLITQLQPDTDYSFVLTSRGNIAGGLQ
QQVSIRTAPDLIQTRPIYTTHQAQGGKMTINLPKVQTTTRVRWYYIVVVPVSQSTRRWKN
PDEMDLDELLKSSEGPVLRRRRHLDSSKPYIAAKLASLPTTFTLGDEKTYNGFYNKPLTS
QQEYLCFVLAVLRYEGTDGTANYMTFSASPYSDLIQVTTRLSQGMEQPEMLWVMGPVLAV
VLIIIIVIAILLFKKKRASPLPKDEHSGGVKDSLLANSSDPVEMRRLNYQTPGMREHPPI
PVIDLADHIERLKANDGLRFSQEYESIDPGQQFTWENSNMEVNKPKNRYANVIAYDHSRV
VLTSVDGKGSSVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRSSTIVM
MTRLEEKSRVKCDQYWPSRGTETYGMIQVTMLDTVELATYSVRTFALYKNGSSEKREVRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERM
KHEKSVDIYGHVTCMRAQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLYAHIQKLT
QPPPGETVTAMELEFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPFESTRVCLQPIRG
VEGSDYINASCIDGYRTQKAYLATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDLF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaatactcacctggcaatgcccctcttgcccagaggggcgttgctgttcctg
cttctactcaactgcatggggatctcctctctggcagacagcttgccaagttttgtcaaa
tccccagaggaccagacgggcatttcaggcggagttgcgtcgtttgtgtgccaggccgct
ggggagcccaaacccagaatcacctggatgaagaaaggcaagaaagtcagctctcaacgc
tttgaggtgattgagtttgatgatggttcgggctccgtactgcggatccagccactgcgc
acacacagagacgaagccatttatgagtgcacagccaccaacagtgctggcgagatcaac
accagtgccaagcttacagtgcttgaagagaaccagatcccccatggcttccccaccata
gacatgggtccccagctgaaggtggttgaacggaccagaactgccaccatgctgtgtgct
gccagtggaaatccagacccagagatctcctggttcaaggacatgcttcccgtggacatc
agcagcagcaacgggcgcattaaacagcttcgctcaggagccctgcaaattgagaacagc
gaggaatcagaccaggggaaatatgaatgtgttgccatgaacagtgctgggacccgttac
tcctctcctgccaatctctacgtacgagtgcgaagagtcccacccagattctccattcca
cccaccaaccaagaggtgatgccaggcggcagcgtcaacctgacatgtgtggcggtgggc
tcgcccatgccttacgtcaagtggatgaagggcgaggtggagctgacaaaggaagaagag
atgccaatgggacgcaacgtgctggaggtcaccaacatacgggagtcggccaacttcacc
tgcgtggccatgtcctccctgggcatgatccaagccactgcccaggtcactgtcaaagca
ttgccaaagccccctacctcgctcatagtgactgagaccacagcaaccagcgtgactctc
acctgggactctgggaacccagaacctgtctcctactacatgattcagtacaaagccaag
gcatcagacaatggcttccaggaagtggagggtgtggccaccacccgttacagcatcggt
ggacttagcccctactctgaatatgagtttcgtgtcatggctgtcaacaacattggccgc
gggccacctagtgaccctgtagagacacgcactggtgaacaggccccctcctcaccacct
ctgcacgtccaagcacgcatgctgagtgccagcacaatgctggtccagtgggagcaaccc
gaggaacctaacgggcaaatcaggggctaccgggtctactacagctcggacctaacggct
ccactcagcgcctggcagaagcacaacacagatgacagcagtctgaccaccatctcaggc
ctgactcctgatatcacctacagcctcagggtactgggttttacctcagtaggcgatggg
ccaccttctgacatcctgcaagtcaaaacccagcagggagtccctgcccagccgtccagc
tttgaagctgaagccgagttggacacccgcatcgtgctaacatggctgtggcccgtacag
gaccccatcactaagtatgagctgcagtactgggagaatggctcggacaacaagctccat
gtgtccttcaacccagcgggctcatatgctgtggatggtctgaagcctgacactctgtac
catttctcgctggcagcccgttctgagatgggtttaggcgtctacactcagcccatagaa
gttcgcactgcccagtccaccccatctgccccccctcaggaggtacatctggtcagcctc
agctccactagcctcaaggtgagttgggtggcaccgcccgccgctagtcgccacggcgcc
attgtgcgctacacagtcagctaccaggccttgactggagaggacacggagcgacatgag
gtggcgggcatcggtgcagaagctaccagctatgtgctggagggcctggagaagtggact
gagtatcaggtgtgggtgagggcacacactgacgtgggcccgggccctgagagtgcccca
gtgaggatgagaaccaaagaggatgtgccgggagcacctcccaggaagctggaggttgaa
gccgtaaactcaacagccattcgagtcacctggaagccgcctctgcaggtgaaacagcac
ggccaaatccgaggataccaggtcatcttctcccggctcgaaaacggtgaaccacgaggc
cagcctaacatcatggacgtggctttgccagaggcacaggaggccatcattagtggactg
cattctgaaaccacctactctgttactgtagcagcatacaccacaaaaggagatggagca
cgtagtaaagctaaagtcatcaccaccactggagcagtgccaggcaagcccactatgatg
atcagcaccactatgggcaacacagcgctgatccaatggcagccgccaaaggaaatggtt
ggtgagttgatgggctaccagctgcagtacaagcgcactgatgacgacgcctacatctca
cgtgagctggggaagaatgaagatcactacactgccactggattgcataaaggtgccacc
tacgtcttccgccttggtgctcgtaaccgagcaggcatcggtgaggcctatgtaaaagag
atcaacaccccagaagacgtgccctcaggcttccccttgaacctgcaagtcactggactg
acccaatccagcacccagctaacatgggagcccccactgctgcccgaaaggaacggcaag
atccaatactacgtggtggtgtacagagacatcaacagtcagcagaacagcaccaaccgc
acttctgacaggcacatgactatccagggccttaatcctgacaccacttatgacatccgg
gtgcaggcattcaccagcaagggtgggggacccctcagccccagcatccagagcaggacc
atgtcaaatgattttcccaccctaaactttggtgtcaaagctgtcatgaaaacatctgtc
ctcctcacctgggatttgcctccaaactacaaaccagcagtgcctttcaagatcttgtat
aaccagcaaagcgtggaggtgcaaggaaacctgaagaggaagctgatcacgcagctgcag
ccagacacagactactcttttgtgctgacaagcaggggtaacatagcaggaggtctgcag
cagcaggtgtccatccgaactgcccctgacctgatccaaaccaggcccatttacaccaca
catcaggctcagggtggcaaaatgaccatcaacctgccgaaggtccagaccaccacacgt
gtgaggtggtactacatcgtggtggtgccggtgtcccaatcaacgcgccggtggaagaat
ccagacgagatggacctggatgagctgctaaagtcaagtgaaggccctgtcctgaggcgt
cgacgtcaccttgactcctccaagccttacattgctgccaagttggcttcactgccgacc
accttcacccttggcgatgagaagacatacaacggcttctacaacaagcccctgaccagt
cagcaagagtatctctgctttgtcctggctgtactccgatatgaagggacagatggcact
gctaattatatgacattttcagcaagtccctactcagacctcatccaggtcaccacacgt
ttgtctcaggggatggagcaacccgaaatgttgtgggtcatgggcccagtgttggctgtg
gtcctcatcatcatcatcgtcatcgccatcctgctctttaagaagaaacgggcatcacct
ctacctaaggatgagcactcaggtggggtgaaagactccctgctggctaactcgtccgac
cctgtggagatgagaagactcaactaccaaaccccaggaatgagggagcacccgcccatt
cctgtcattgacctggctgaccacatagagcgactgaaagccaatgacggcctccgcttt
tcccaagagtatgagtccattgatccaggccagcagtttacctgggagaactccaacatg
gaagtcaacaagccaaagaatcgctatgcaaacgtcatcgcctacgaccactccagagta
gtccttacctctgttgatggtaagggctcatccgttcctggcagtgactacatcaacgcc
aactacatcgatggttacaggaagcagaatgcctacatcgccacacaggggcctctgccg
gagacattgagcgacttctggaggatggtatgggagcaaagatccagcaccatcgtcatg
atgaccagactggaggagaagtcacgggtgaagtgtgaccagtactggccgtcacgagga
acagagacctatgggatgatccaggtcaccatgctggacactgtggagttggccacttac
agcgtccgtacattcgccctgtacaagaatggctccagtgagaagagagaggtgcgccag
ttccagttcatggcctggccagaccacggggtgccagagtacccaacccccattttggct
ttcttaaggcgggtaaaggcctgcaatcctccagatgcaggacctatggtggttcactgc
agcgctggcgtgggcaggactggctgcttcattgtgatcgatgccatgctggaacgcatg
aagcatgaaaaatctgtagacatctacggacacgtgacgtgcatgcgcgcccagaggaat
tacatggtacagaccgaggaccagtacatcttcattcacgaggccctactggaggccgcc
acctgcggcaacaccgaggtgccggcacgcaacctgtacgcccacatccagaaactcacc
cagccaccgcctggcgagacagtcaccgccatggagctggagttcaagagactggccaac
tccaaagcccacacttcacgcttcatcagcgccaacttgccctgcaacaagttcaagaac
cgtctggtcaacatcatgccttttgagtccacccgcgtctgcctgcagcccatccgtggc
gtcgagggctccgactacatcaatgccagctgcatcgacggctacagaacacagaaggcc
tatctggccacacagggtccactggccgagactactgaggacttctggaggatgctgtgg
gagcacaactctaccatcgtcgtcatgctcaccaagctacgagagatgggacgggagaag
tgccatcagtactggccagcggagcgttcagccaggtaccagtactttgtggtggatcca
atggctgagtacaacatgccccagtacatcctccgagagttcaaagtcacagatgccagg
gatggccagtccagaacaatccgccaattccagttcactgactggccagagcaaggtgtg
ccaaaaactggagagggcttcattgattttattggacaagtgcacaaaaccaaggaacag
tttggacaggatggaccaatcactgtacactgcagtgccggtgtgggcaggacaggcgtc
ttcatcaccctcagcattgtgctggagaggatgaggtacgagggcgtggtcgacctcttc
cagactgtgaagacacttcgcacccagcggcctgccatggtgcagaccgaggaccagtac
cagttgtgctacagggcagcattggagtacctggggagctttgaccactatgcaacgtaa
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