Scomber scombrus (Atlantic mackerel): 133991464
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Entry
133991464 CDS
T10651
Symbol
wdpcp
Name
(RefSeq) WD repeat-containing and planar cell polarity effector protein fritz homolog
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133991464 (wdpcp)
Cilium and associated proteins [BR:
ssco03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
133991464 (wdpcp)
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Gene cluster
GFIT
Motif
Pfam:
Frtz
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
133991464
NCBI-ProteinID:
XP_062285867
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Position
12:23651518..23725307
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AA seq
699 aa
AA seq
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MAFCLADLHLWSTKSSLQVKDTDIGTYQYYDKGEPVNPLKHHYYNEKLQFCEARGYSWTP
RNRRPEKLRDSLKELEELLQTNTCVHTRWRNKHCCQLMLSSGVLVTLTLNGPQLEQVCVD
RTLVGRLPANTVTDAVLSDRLIVLAFLEQSQVAAVYLNKKNLDSPEAGRRTDKLSPSEIK
VSCVDVSGRGRRLLRRVGLNRLQDVALCWWNLDEAGEELWPWTPTNTNRDNLVLLSCSPV
EGLKVLSSIRTESNPLDCCFSRFQPYQLLTVELPAGPQGSSEEPWADACVYECARGRMHR
LSVTRIPLPSHPVSCLRHPCETTLLMGLSDSSLVLYDQRRGVSLLASCPVPATLLAWHPA
GAVAMVGGGHGELMCFDVGLAPVSMALVAEEVAPAATLRLAQHLRCSGGLEGLQWGTGLD
GGPEGTDTLMLAFHGGPLAVLRFRLGAVTGGQMGPGELLQQRLRCGQVREALGILEAMDW
STMGDECFRGLSSVTNHLLRLELNTEREAQLEAALGVFYAPPAPLSDMVILEYKEGVFKY
ARRFFHLLLRHQRFEKAFLLAVDLEARDLFMDLHYVASDKGEVVLADVAKTKANEIEAQA
IAGNDPLRGRNGVFGSSFGNRQAERNRSAAGPSYPSTSTTHADGRANQRRPQAENIRVTV
NPDIFRSWRQTGSNSEGDRDGRNDEEDLGTLHVVHLGMV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctgcctggctgatctgcacttgtggtccaccaagagctcactccaagtcaaa
gatacagatattggcacctatcagtactacgataaaggagagccagtcaatcccctgaag
catcactactacaatgagaaactccagttctgtgaggctcgaggctattcgtggaccccc
aggaaccgccgaccggagaagctacgcgattcgctgaaggagttggaggaactgttgcag
accaacacctgcgttcacaccagatggaggaacaagcattgctgccagctgatgctgagc
agtggagtactggtgacgctgactctaaatggacctcaactcgaacaagtgtgcgtagac
cgaacattggtgggccgactaccagccaacaccgtgacggatgcggtgctgagcgatcgg
ctgattgtgctggccttcctggagcagagccaagtggctgcagtctacctcaacaaaaag
aacctggactcccctgaggctggcaggcgaacagacaaactctcaccctctgaaatcaag
gtgtcctgtgtggatgtgagcggacggggacgtaggctcctcagacgtgtgggtctcaac
cgtctccaggatgtggcgctgtgctggtggaacctggacgaggccggagaggagctgtgg
ccctggactcctacaaacacgaacagggacaacctggtcctgctgagctgctcgcctgta
gagggcctcaaggtcctcagctctatccggactgaaagcaatcctctggactgctgcttc
agtcggttccagccctaccagctgctaacagtggagctccccgctggaccccaaggatcc
agtgaggaaccctgggctgacgcctgtgtgtacgaatgtgcccgagggcgcatgcatcgc
ctttctgtcacccgaatcccgctgccttcccatcctgtttcctgcttacgtcacccatgt
gagacaacactcctcatgggcttaagtgactcctcactggtactgtacgaccagcgacgg
ggggtatctctactggcctcctgccctgtgccagccaccctcctcgcctggcatcctgct
ggggccgtggccatggtagggggagggcacggggagctgatgtgctttgatgtgggcttg
gcacctgtaagcatggcactggtagcggaagaggtggctccggctgccacactaagacta
gctcagcacctgcgctgctctggaggcctggagggactacagtgggggactggcctggac
ggaggcccagaggggacagatacactgatgctggcctttcatgggggaccactagcagtc
ttgagattccgactaggcgctgtgaccgggggccagatgggtccaggggagcttctgcag
cagcggctacgttgtggtcaggtccgagaggcactgggaatcctggaggccatggactgg
agcaccatgggagacgagtgctttcgaggcctgagctccgtcaccaaccacctgctgagg
ctggagctgaacacagagagagaggcccaactagaagcagcactgggtgtgttttatgcc
ccacctgcccctctctctgatatggtgatactggagtacaaggagggagtctttaagtac
gcccgtcgcttttttcacctcctcctcagacaccaacgctttgagaaggccttcctcctc
gctgtagatctagaagccagagacttattcatggacctccattatgttgccagcgataag
ggcgaggtggtgttagcggatgtggccaagacgaaagcgaatgaaatcgaggcccaggcc
atcgcaggcaacgaccctctgagaggcagaaatggtgtgtttggttccagttttgggaac
agacaggcggagaggaaccggagtgcagcaggaccttcttacccaagcacttcgacaaca
catgctgacggaagagccaatcagaggaggccacaggcggagaacatacgtgtgaccgtg
aacccggatatcttcaggtcatggaggcaaacaggaagcaacagtgaaggtgacagagac
ggcaggaatgatgaagaagacctcgggacgctccatgtggtccatttaggaatggtttaa
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