Scomber scombrus (Atlantic mackerel): 133992732
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Entry
133992732 CDS
T10651
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a
KO
K16798
zinc finger protein GLI2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
133992732 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133992732 (gli2a)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
133992732 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
133992732
NCBI-ProteinID:
XP_062287430
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All DBs
Position
13:complement(27373019..27402153)
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AA seq
1409 aa
AA seq
DB search
MEHYLRSVHGSPTLSMISAARGLSPAEVTHEHLKERALFSLPPPPPGANPTEYYHLMASA
SQRSPYGDLLMQSSAAAAAAAAAAAAAAHLPEYISPVDVSRFSSPRLTPRLSRKRALSIS
PLSDASIDLQTMIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFSFPHPINPVAY
QQLLSQQRGLNAFGHTPPLIQPSPSSFSARQHPLTASPMTTSHNSSNSETNQNAGGDPAV
SSTVNPLITKRSKVKTEAEGPLPISPSSQDHGGGILDLSEDLDKDECKQEPEAVYETNCH
WEGCTKEYDTQDQLVHHINNDHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGE
KPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSN
EKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRSDVPPRLPPKGNGENEANSK
HGARGGLDGKLEANSTSRGVEDCLQVKSIKTENSMTYQSSPGGHSSCSSEPSPLSSANNN
DSGVEMALHSGGSFGDLSAQDECPMVDSTVSAGGQHAGMGLQMRKAVGHGGAITIKLENI
KKERLKTVRDSCPWGNSAPQLPQGQRNSTKLPPIPAVGSLLESSNIMSNFNGSYPGQRGG
DLSSCEVTLLNQLNERRDSTTSTMSSAYTMSRRSSGISPCYSSRRSSEASQFGTNRHNNI
SSADSYDPISTDLSRRSSEASHCGGGGGGGGGSSGGLPSLLSLTPAQHYRLKAKYAAAIG
GAPPTPLPNMDRMSLRTRMALYGDSQESSSHLFHHPPSGTVPRRCSDLGYGNHSMMPHEV
PNNLPRRASDPVHRPALDPLSFPRVQRYNSMNSMNPMSGSSAAERHQTLAMQGYTRSDGS
LQRYPFAPRPPSICENVAMENMAVDGEQGAEDDIVLPDDVVQYLRTQNTGNSGHNSGQAD
YHFNNQSQGYQTGMPPPLSFYTQRRMAMADATMNQSGQDMQSCQMGQGGSQQPFSAPSNN
MNKNNMPVQWNEVSSGTVDTTTKLSKQQQHPIRGNLAVVQQRHNFGSFQAQGQGLGSNQQ
VGTMSQNMSMQGYANHNSQRMMNISHQQHQQQRQCNNVNFSEQMSPQQGFGQEAIPNSIS
GSTSVRPTRNGTADPELQNYKARTQADGYSHVNQVDQQQNCSVLSQQQQQQHNIHNGGRG
MLHPRPPTEPKSSARQHAGLSIMQPSRIPKSSDLSPSLGNDTSEASPKRPSGSEAHHSNS
ENPNSAVFYTGQIHLFEPASASFDVPMSPCANQAPASNNTAAANMASPGVNQVSSSTVDS
STGGSGGAEHAQIDFDTMLDDGDHSSLMSGTLSPGLLQSLSQNSSRLTTPRNSVTLASVP
AGIGNMAIGDMNSMLTALAEESKYFSLIS
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggagcactacctacgctcggtacatggcagccccaccctctccatgatctcagcggca
cgaggactgagccctgctgaagtgacccacgaacacttgaaggaacgtgccttgttcagt
ctcccccctccgccaccaggggccaaccccacagagtactaccacctgatggccagcgcc
agccagcgaagcccctacggtgacctcctgatgcagagcagtgcagcagcagcggcagca
gcagcagcagcagcggctgcagctcacctaccagaatacatcagccctgtagatgtatca
cgtttctccagtccacgactgacgccccgactcagcaggaagagggcgctatccatctct
ccgctgtcagacgccagcatcgacctgcagactatgatccgcacctcgcccaactccctg
gtcgcctacatcaacaactcccgctccagctcggccgccagcagctcctatggccacctt
tcagtcggagggatcagcccttcattcagcttccctcatcccatcaacccagtggcgtac
cagcagctgttgtcccagcagaggggtttgaacgccttcggccacacgcctcctctcatt
caaccgtcgccgtcatcgttctcggctcgccaacacccactgacggcttcaccgatgacc
acctcccacaacagctccaactctgagacaaaccagaacgctggcggagacccggcagtg
agcagcactgtcaacccactgatcaccaagaggtcaaaggttaaaacagaagcagagggt
ccgctgcccatctcaccgtcctctcaggatcacggtggagggatcttggacctgagtgaa
gatctggataaagacgagtgcaagcaggagcctgaggccgtatatgagaccaactgccac
tgggagggctgcacaaaggagtatgacacccaggatcaactcgttcatcacatcaacaac
gaccacatccacggcgagaagaaggagtttgtgtgccgctgggaggagtgttcacgggag
cagaagcccttcaaggcccagtacatgctggtggtccacatgaggagacacacgggggag
aagccgcataaatgcacgtttgagggctgcgcaaaagcttactctcgcctggagaacctc
aagacccacctccggtctcacaccggggagaagccctatgtgtgtgaacacgaaggctgc
aacaaggccttttccaacgcctcagatcgggccaagcaccagaaccgcacacactctaat
gagaaaccatatgtgtgtaagatcccgggctgtaccaagcgctacacggaccccagctct
ctcaggaagcacgttaagacagtccacggaccagaagcccacgtcaccaagaaacaacga
agcgacgttcctccgagactgccacccaaaggcaacggagagaacgaggcgaattccaaa
cacggtgcgagaggcggcttggacggcaagcttgaagccaacagcacctctagaggagtg
gaagactgcctacaagtcaaatctatcaagactgagaactccatgacatatcagtccagt
cctggtggccactcgtcatgtagcagtgagccatcgcctctcagtagcgccaacaacaac
gacagtggggtagagatggccctgcacagcgggggcagcttcggggacctcagtgcacag
gatgagtgccccatggttgactccactgtttccgctggggggcagcatgctggaatgggg
ctccagatgaggaaagctgtgggtcatggtggtgccatcaccatcaagctggagaacatc
aagaaggaaaggctgaagacagtgagagactcctgcccctggggcaactctgcaccacaa
ctaccacagggtcaacgcaacagcacgaagctgcctcccatacctgcagtcggttccctg
ctggagagctcaaacataatgagtaacttcaatggttcataccctggccaacgtggcggc
gacctgtcttcatgtgaagtgacactgctgaaccagctgaacgagcggcgtgacagtacc
accagcaccatgagctcagcatacacaatgagtcggcgttcatctggtatttcaccatgc
tactccagccgtcgctccagtgaggcttcacagtttggcactaaccgacacaacaatatc
agttcggctgactcctatgacccaatctccactgatctgtctcgtcgctccagtgaggcc
agccactgtggaggaggaggtggtggcggtggtggcagtagtggaggtctcccaagcctt
ctcagtctgacaccagctcagcattatcggctcaaggcaaagtatgctgctgccattggc
ggagctccacccactcctctccctaatatggatcgaatgagcctgaggacccgcatggcg
ctctacggtgactcccaggaaagctcatcccacctattccatcatccaccatctggtact
gtgccccggcgttgcagtgacctgggatatggcaaccacagcatgatgccccatgaggta
cccaacaaccttccacgccgtgccagtgacccagtgcatcgtcccgccctggaccctctc
tcctttcctagggtccagcgctacaacagcatgaacagcatgaaccccatgagtggttca
tcagctgcagaacgtcaccagacactggctatgcagggctacactcgctctgatggcagc
ctgcagcgctacccattcgcccccagaccacctagcatttgtgagaacgtagccatggaa
aacatggcagtagatggggagcaaggtgcagaggatgatatagtgcttccggatgatgtg
gtgcagtacctcagaacccagaacactggcaactcaggtcacaactcggggcaagctgac
taccatttcaacaatcagtctcagggctaccagacaggcatgcccccaccattatcattt
tatacacagagaaggatggccatggctgatgctaccatgaatcagtctggtcaggatatg
caatcctgccagatgggtcaaggtggctcccagcagcccttctcagcaccatcgaacaac
atgaacaagaataatatgccagtgcagtggaacgaggtgagctcggggactgtggacacc
acaaccaagctctccaaacaacagcagcatcctatcaggggaaatttagctgttgttcag
cagaggcataactttggttccttccaggcacagggtcaaggccttggcagcaaccagcag
gtagggactatgagtcagaacatgtctatgcaggggtatgcaaaccacaacagccagagg
atgatgaatatatcccaccagcagcatcagcaacagaggcaatgcaacaatgtgaacttt
agtgagcaaatgagtcctcagcaagggtttggccaagaggcgatcccgaattctatatct
gggagcactagcgtgagacctacccgtaacggtacggcagacccagaactgcaaaattac
aaggcaaggacacaggctgatgggtattcgcatgtgaaccaagtggatcagcaacaaaat
tgcagtgttctctctcagcagcagcagcagcagcacaatattcataatggaggcagggga
atgttacatcccaggcctcccacagagcccaagtctagtgccagacaacacgcagggtta
agcataatgcaaccgagccgaatacccaagtcatctgatttgagtcccagccttggtaat
gacacctcagaggcaagtccaaagaggcccagtggctcagaggcccaccatagcaactct
gagaatcccaactctgctgtgttctacacaggtcagattcatttgtttgagccagcttct
gcctcctttgatgtccccatgtcaccctgtgccaaccaggctccagccagcaacaacact
gctgcagctaacatggcctcaccaggagtcaaccaggtttccagcagcacagtagattcc
tccactggtggatctggtggcgcagagcacgcccagatcgactttgacaccatgctcgat
gacggggaccactccagcttaatgtcgggcaccctgagtcctggccttctgcagagcctc
tcccagaattcctcacgtctcaccaccccacgcaactctgtcaccctagcttctgtaccg
gcagggatcggcaacatggccatcggtgacatgaactctatgctcacagccttggctgaa
gaaagcaagtacttcagcctgataagttga
DBGET
integrated database retrieval system
