Scomber scombrus (Atlantic mackerel): 133992785
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Entry
133992785 CDS
T10651
Symbol
hacd2
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00062
Fatty acid elongation
ssco01040
Biosynthesis of unsaturated fatty acids
ssco01100
Metabolic pathways
ssco01212
Fatty acid metabolism
Module
ssco_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
133992785 (hacd2)
01040 Biosynthesis of unsaturated fatty acids
133992785 (hacd2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssco01004
]
133992785 (hacd2)
Enzymes [BR:
ssco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
133992785 (hacd2)
Lipid biosynthesis proteins [BR:
ssco01004
]
Fatty acid synthase
Component type
133992785 (hacd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
133992785
NCBI-ProteinID:
XP_062287508
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All DBs
Position
13:3831532..3842800
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AA seq
244 aa
AA seq
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MSAAAPGTSKAAHSDVAPKKKKGPGALATAYLVIYNVVMTAGWLVIAVGLVRAYLARGSY
HGLYYSIEKPLKFFQTGALLEILHCAVGIVPSSVVLTGFQVMSRVFLTWAVTHSVREVQS
EDSVLLFVTAWTVTEIIRYSFYTFSLLNHLPYLIKWARYTFFFVLYPMGVTGELLTIYAA
LPYVQKTGLYSVTLPNKYNFSFDYHSFLILVMISYIPLFPQLYFHMIRQRKKVLGHVEEY
NKVE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagctgctccggggaccagcaaggcggcccacagcgatgtggccccgaagaag
aagaagggacccggcgccctggctacagcttacctggtcatttataacgtggtgatgaca
gcggggtggctggtgatagctgtaggtctggtcagagcttacctggccagaggcagctac
catgggctctactattccatagagaagccactcaagttctttcagaccggagctcttctg
gagatactgcactgtgctgtaggaatcgttccctcctctgtggtcctcactggtttccag
gtcatgtctcgggtcttcctcacctgggccgtcacacacagtgtcagggaggtgcagagc
gaggacagcgtgctgctgtttgtcacagcctggaccgtgacggagatcattcgctactct
ttctacacgttcagcctgctcaatcacttgccgtacctcatcaaatgggcaaggtacacc
tttttcttcgtgctgtatcccatgggagtgaccggggagctgctgactatctatgcagcg
ctgccgtacgtacagaagacaggcctttattcggtcaccctccccaacaagtacaacttc
tccttcgactaccacagcttcctcatcctcgtcatgatctcctacattcccctcttcccc
cagctttacttccacatgatacgacagaggaagaaggtgctcggccacgtggaggagtac
aacaaggtggagtga
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