Scomber scombrus (Atlantic mackerel): 133992917
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Entry
133992917 CDS
T10651
Name
(RefSeq) radixin
KO
K05762
radixin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
ssco04530
Tight junction
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133992917
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133992917
09142 Cell motility
04810 Regulation of actin cytoskeleton
133992917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133992917
04147 Exosome [BR:
ssco04147
]
133992917
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
133992917
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133992917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
133992917
NCBI-ProteinID:
XP_062287699
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All DBs
Position
13:3295625..3343484
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AA seq
572 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYTDSKGYITWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQKLFFLQVKEAILNDENYCPPE
TAVLLASYAVQAKYGDYNKDMHKPGYLASDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHR
SMLREDAMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHEDKLSPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKREHAEKEKERIEREKDELIERLRQIEEQTHR
AQKELQEQTRKALELEQERRRAKEEAERLEKERQAAEEAKAALAQQAADQMKTQEQLAGE
LAEFTAKIALLEEAKRKKEEDATEWQHKALAAQDDLEKTREELKMAMTCPPAPEHDEQDE
TNAEASAELLSDGVTSHRSEEERITEAQKNERVKKQLQALSSELAEARDDSKKTQNDMLH
AENVKAGRDKYKTLRQIRQGNTKQRIDEFESM
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaccaatcaacgtgcgcgtcaccaccatggacgctgagctggagtttgccatc
cagcccaacacgacaggcaaacagctctttgaccaggtggtgaagacggtgggtctgagg
gaggtctggttcttcggcctgcagtacacagacagtaaaggatacatcacgtggctgaag
ctcaataagaaggtgacccagcaggatgtgaagaaggagaatcctctgcagttcaagttc
agagcaaagttcttcccagaggacgtttctgaggagcttatccaggagatcacccagaag
ctcttcttcctgcaggtgaaagaagccattctgaatgatgagaactactgtcctccagag
acggctgtgctcttggcttcctatgccgtccaggcgaagtacggcgactacaacaaagac
atgcacaagcctggctacctggcctccgaccggctgctgccacagagagttttggagcaa
cacaagctgacaaaggagcagtgggaggacagaatacagacttggcacgaggaacacaga
agcatgctcagggaggacgcaatgatggagtatctaaagatcgctcaggacctggagatg
tacggcgtcaactactttgaaattaaaaacaagaaaggcacagaactgtggctgggggtc
gacgccctcgggctcaacatctacgaacacgaagacaagttgtcaccaaaaatcggcttc
ccctggagcgagatcagaaacatttccttcaacgacaagaagtttgtcatcaaacccatc
gacaagaaagctccagactttgtgttctacgccccgcggttgcggatcaataagcgcatc
ctggcgttatgtatggggaaccacgagctgtacatgagaaggaggaagcccgacaccatc
gaggtgcagcagatgaaggctcaggccagagaggagaagcaccacaaacagatggagaga
gcgcagctggagaacgagaagaagaaacgcgagcatgcagagaaggagaaggagaggata
gagcgagagaaggacgagctgatcgagaggctgaggcagattgaagagcagacacacaga
gctcagaaagagctgcaagagcaaacccgcaaggcgttggagttggagcaggagaggagg
cgggcgaaggaggaggcggagcggctggagaaggagaggcaggcggcggaggaggccaag
gcagcgctggctcaacaggctgctgaccaaatgaagacccaggaacagctggctggtgag
ttagcggagttcactgccaaaatcgctctgcttgaagaggccaagaggaaaaaagaagag
gacgcaacagagtggcaacacaaggctctggccgcacaggacgacctggagaagaccagg
gaggagctgaagatggccatgacgtgtcctccggcgccggagcacgacgagcaggacgag
accaacgctgaggcgagcgccgagctgctcagcgacggcgtcaccagccaccgcagcgaa
gaggagcgcatcacagaggcgcagaagaacgaacgtgtcaagaaacagctacaggctctg
agttcggagttggccgaggcgagagacgacagcaagaaaacacagaacgacatgctgcac
gctgagaacgtcaaggcaggcagagacaagtacaaaaccctgcgccagatccgccagggc
aacaccaagcagcgcatcgatgagttcgagtccatgtga
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