Scomber scombrus (Atlantic mackerel): 133993103
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Entry
133993103 CDS
T10651
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133993103 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133993103 (trpm2)
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
133993103 (trpm2)
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133993103 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
133993103
NCBI-ProteinID:
XP_062287944
LinkDB
All DBs
Position
13:complement(16747317..16762967)
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AA seq
1419 aa
AA seq
DB search
MEDAKVKSQLLHSLAISIAKASKHFSLSPTFQRCTFASWIKENIRKRECCLFEKGDREDI
CKCGYSKTVHVDEAIKPDEFTGESWDIHRHVREVPSDAFGDINFGGLGQKTGKYARVSTD
TSPEILYELLTEQWKLSPPNLLISVTGGAKNFYLKAGLKNMFHRGLIKVAQTTGAWIITG
GSHAGVMKHVGQALRDYTLSSNSMQGQIVAIGVATWGIIHNRDVLVHSEGCFPAHYSMDI
NGQGRLSCLDNNHTHFLLVDDGTHGKYGVEIELRSRLEKCISRKHLGNKESGVTIPVVCV
VLDGGPGTLNTIYNAMLNGTPCVILEGSGRIADVIAQVSGLPVTRITISLISQLLEKFFG
QEYENFADLKIIKWTKQIQDIIRMSHLLTVFRVSEDNHCDVDVAILQALLKASRISETLG
TEAWKRQLELAIAWNRVDIAETEIFTEESQWKSSDLHWAMFSALVGNKPQFVSLLLENGV
SLRDFLNDEDTLCELYKQLPPCFFLNKLAKRVHSSRRSMKRVFFRSRPHRGKGESISMTH
VSDEVRHLLGSFTKHLYPATTTHDFNVSMEDSSVSELKCTPALLSTEAQRDPGRDLFLWA
IVQNNRELAEIAWEQCRDCMSAALAASKILKKMAQEGNDADEAEDMCALASHYEQHAIGV
FSECYNCDEERAQKLLVRASPYWGRTTCLRLALEADDKNFVALSGVQALLTQIWCGGLSV
DNPVWRVLICMIFFPLIYIGFLTSSLRHLKPVSKWSRLACLYNSPQVKFYFNIVSYFAFL
FLFAVVLMIDFQETPSAGEVLLYIWLFSLVCEEVRQLFHDPDGFGFRKKSTMYIKDMWNI
LDAMSIILFIIGLAFRLTTELFYAGKVLLCIDFVIFCLRLMAIFTISRTLGPNIIIVRRM
VMDMFFFMFLLSIWVVAYGVAKQGILIHNDNRLDWIMRGAVYEPYLIIFGNFPTNIDYAE
FNIDTCTMNGTDPLKPKCPVLNENQTPAFPEWLTIIMLCVYLLFANILLLNLLIAIFNFT
FQEVQDNTDRIWKFQRYELIKEYHSRPAAPPPFIIFSHLYLLIRNTVLCKPPIKSKEFKD
VLPQIEEEELLSWEALMKDRYLLSTQQEQSQSMERRILDTAQKVTTMTDMLEREEETSSA
AMMKRLARLEEQVSQSAKILQWIMDSLKSQGFAAKESQPTTSTTTDSESPDIEKEKGGFH
VNARQFDYPNSKLKRFPVPEEKVPWEVKFISYMPTPYTPEDSGDHRDGAESEALDNYRNP
SGRTGITGRGALSRLGPNLNVDLVLTRWQDSERSVLEFLAIGDENHQTVTLPGGPVESAH
HLPLTLESTMGKKLYEKLNEKISEGTKVSTGYVDDSRNTDNAWVEITVINLHLDRTSQIM
TEINKVACLQWQEVNKKTRLISNQRDSLRRVADLHNRKF
NT seq
4260 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgctaaggtgaagtcacagctgcttcattctctggcgatcagcatagccaaa
gcatctaagcacttttctctttcacctactttccagcgctgcacctttgcctcctggatc
aaggagaacatccgcaagagggaatgttgcctctttgaaaaaggtgacagagaggatatc
tgtaagtgtggctactcaaagactgtgcatgtggatgaagccatcaagccagacgaattc
acaggcgagtcgtgggacatacacagacatgtccgtgaagtgcccagcgatgctttcgga
gacatcaactttggtggtttgggacagaagactggcaagtatgcgcgagtgtccacagac
accagccctgagatcttgtacgagttactgactgaacagtggaaactttcccctcccaac
ctgctgatctcagtgaccggaggagccaagaacttctacctgaaggctgggctcaagaat
atgttccacagaggtcttatcaaagtggcccagacaacaggtgcgtggatcatcaccgga
ggttcccatgcaggtgtgatgaagcatgtagggcaggctctgagggattacaccctgagc
agcaactccatgcagggccagatcgtggcaatcggagtggcaacatggggaataattcac
aacagggatgttttggtgcattcagagggttgtttcccagcccattactcgatggacatc
aatggccagggccgactgtcctgcctcgacaacaaccacacgcatttcctgctggtggat
gatgggacccatggaaaatacggggtggaaatcgaactgcggagtcgtctggagaaatgc
atctccagaaagcatcttggaaataaagagagtggtgttaccatccctgtggtgtgtgtt
gtcttggatggaggaccaggtactctgaataccatctataacgccatgctgaatggtaca
ccgtgtgtgatcctggagggctccgggaggatagcagatgtgatcgcccaggtatcagga
ctgccagtgacccggatcactatcagcctcatcagccagttattagagaagtttttcggc
caagagtatgaaaacttcgctgacctcaagataataaaatggaccaagcagattcaggac
atcatcaggatgtcacacttgctgacagtattcagagtaagcgaggacaatcattgtgat
gtggatgtagccattcttcaagcactccttaaagcttcgaggatcagcgagacactggga
acagaggcctggaagaggcagctggagctggctatagcctggaaccgagtggacattgct
gagactgagatcttcactgaggaaagtcagtggaagtccagtgacctccattgggccatg
ttctccgccctggttggcaacaagcctcagtttgtgagtctgctgctagaaaacggtgtg
agtctgagggatttcctgaatgacgaggacactctgtgtgagctctacaaacaactgccc
ccctgcttttttctaaataagctggccaagcgggtccacagttcccgccgcagtatgaaa
cgagtgttcttcaggtctcgacctcaccgagggaaaggtgaaagcatttccatgactcat
gtgtccgatgaggtgcgccacctgctgggcagtttcaccaagcacctctaccctgccacc
acgacacatgacttcaacgtgtccatggaggattcatcagtgtcagaactaaaatgtact
ccagctctactcagcactgaggcacagagggatccaggcagagatctttttctttgggct
attgtccagaacaatagagagctggctgaaatagcctgggagcagtgtagagactgcatg
tctgctgctctggccgccagtaagatcctgaagaaaatggctcaagaaggaaatgatgca
gacgaggcagaggatatgtgcgcactcgccagccactatgagcaacatgccattggtgtg
ttcagcgagtgttataactgtgatgaggagcgagctcagaagttgttggttcgtgcgtcg
ccgtattggggcaggacgacgtgcctgaggctggcactggaggcagatgataagaatttt
gtagctctgtcaggtgttcaggctcttctgactcagatctggtgtggcgggctctcagtg
gacaaccctgtgtggagagtcctaatctgcatgattttcttcccgcttatctacattggc
tttctgacttccagcctgcggcacctgaagcctgtgagcaagtggtccagattggcctgc
ctgtacaactctccgcaggtcaaattttacttcaacatagtgtcctacttcgccttcctc
ttcctgttcgctgtggtgctcatgatcgatttccaggaaacgccatctgctggggaggtg
ctgctctacatctggctgttctctctggtgtgtgaggaggtcagacagttgtttcatgat
cctgatggctttggatttcggaagaaatccacaatgtacatcaaagacatgtggaatatt
ttagatgccatgtccatcatcctctttattatcgggcttgcatttaggctgacgactgag
ctcttctatgcgggtaaagtcctcctctgcatcgactttgtgatcttctgcctccgtctc
atggcgatcttcaccatcagtcgaactctgggaccaaacatcatcatagtcaggagaatg
gtgatggatatgttcttcttcatgttcttgttgagtatctgggtagtggcatacggtgtg
gcgaaacaaggcatcctcatccacaatgacaatcgactggactggatcatgcgcggggct
gtttacgagccatacctcatcatatttgggaattttcccacaaatatagattatgctgag
tttaacattgacacttgcaccatgaatggcactgatcctctgaagcctaagtgtccagtg
ctgaatgaaaaccaaacaccagccttccccgagtggctcaccatcatcatgctttgtgtt
tacttgctctttgcaaacatactgctgctcaacctgctcatagctatcttcaactttacg
ttccaggaagtgcaagacaacacagacaggatatggaagttccagagatatgagctaata
aaggagtaccacagccgtcccgctgcccctcctccatttatcatcttcagccatctttac
ctccttatcagaaacacggtgctgtgcaagccccccatcaaaagcaaagaattcaaggat
gtgcttcctcagatagaggaagaggagctgttgtcctgggaggccttgatgaaggacaga
tacctgctgtccacgcagcaggagcagagccagagcatggagcgacgcatcctggacaca
gcccaaaaggttaccaccatgacggatatgctggagagggaagaggagacgagctctgct
gctatgatgaaaagactggccagactagaggagcaggtttcccagtcagccaaaatcctg
cagtggattatggacagtctgaaatctcagggttttgcagcaaaagaatcacaaccaacg
acatcaactacaacagacagtgagtcccctgacattgaaaaagagaaaggtggatttcat
gtgaatgcccgtcagttcgactacccaaacagcaaacttaaacgcttccctgtgcctgag
gaaaaggtgccatgggaggtcaaattcatctcatacatgccgactccttataccccagag
gacagtggcgaccacagggacggagcagaatcagaagccttagataattacagaaaccca
tcagggaggacgggcatcacgggacgaggtgcgctcagccgcttgggtccaaatctgaat
gtagaccttgtgctcacacgctggcaagacagcgagagatctgttttggagtttctggcc
attggagacgagaaccaccaaaccgtgactttacctgggggacctgtcgaatctgctcat
cacttgccactgactcttgagagcaccatggggaagaagctgtatgaaaagttaaatgaa
aaaatatcggagggcacaaaggtgtctacaggttatgtggatgacagcaggaatacggat
aacgcctgggtggaaatcactgtcataaaccttcacctggacagaacgagccagattatg
acagaaatcaataaggtggcatgtcttcagtggcaggaggtgaataaaaaaacaagactt
atctcaaaccaaagagactctttgcggcgggtcgctgacctgcacaacaggaagttctaa
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