Scomber scombrus (Atlantic mackerel): 133994128
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Entry
133994128 CDS
T10651
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00780
Biotin metabolism
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
133994128 (hlcs)
Enzymes [BR:
ssco01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
133994128 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
133994128 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
133994128 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
133994128 (hlcs)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
133994128
NCBI-ProteinID:
XP_062289318
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All DBs
Position
14:336622..365364
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AA seq
991 aa
AA seq
DB search
MLITLCYVYMWVRFHKCYSVLIRNSLSRLNSSSRRSLSFSRLCSVSTPATTLQTGHHRSR
QQHRPLPPEDTVFLQLGDKSVHVTEPQACDDLSKWTVLLGSSVVCGPGIENISFIIEATG
HRVGYPSSHTSNKKALKWSDCCLPLACSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDN
GLMPSKIIPVLLQESILCELLEKQRPPSPTIVTSVQLCSPMAEKSLPCRLSADHQLLLSN
KGSLFLIPEAKQRLEERRGSEPLCRTQDLASVGDSEDHSLGNHHYMEGHGHNLHLSNCHE
CLELEKSTILSVKYASAENITDLPDDNSVGLDSGDEILDELQHDANVFFDQSDGFQCNRK
PPNILVYTGGCQERFHAVHQVLSECINMENYIIYHLLPQQVLSDPWLDNTKLLVLAEGQA
LTPQLQTCFLNFLGQGGRVLGIASTLCPAGLSMEVRERQRGQICRLSFTREDSTELDLSV
LASGKVYVRDIQGGGEVELWGELKGDVPHQRDMVIVKVTHGEDGGEAVVCQVHLEIAPDS
QNLSLEGFDELKVSNALRYEVLTEILTSLGLSCELNQSPDPSPVHLLATSQETKTAFLKW
LQTRADENGLLMLSKTCLRVVSYCELQNGPLLPESCLALVTDSEESQRWELFNMETYSRN
LKTRVLGRTLLYADVVTSTMDLLEGLTLHLPKDVGLIAIAARQSKGRGQCSSTHLLTQHS
NIPQMSKQFSVVVIFVFFFYSSYLSEVSWGCLVPCRVPLYVFCDPVFAASAGRGRNAWLS
PLGCSMFTLSVEVDLSSRLGQRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYS
KLMKLGGVLVTSTVIGSTFHLLIGCGFNVTNSNPTLCINDLIRQYNIQHNCNLQPLSCAQ
LIARTVSCLEALISSFQQGGPESILPTYYKRWLHSGTRVRLWSEDGPEAEVVGLDPNGFL
QVHSKEQGLVSVEPDGNSFDMMKNLVVIKQH
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgttaataacattgtgctacgtctacatgtgggtgcgcttccataaatgctactctgtg
ctgatccggaacagtctgtccagactgaacagtagcagccgcagaagtcttagtttcagc
cgcctctgctcggtttcaacgccagctacaacactgcagactggacaccacaggagcagg
cagcagcacagaccgctgccacccgaggacaccgtcttcctccagctgggagacaagtcc
gtccatgtcacggaacctcaggcatgtgatgacctcagcaaatggactgtgttattgggg
tcctctgtggtttgtggtccaggaatagagaatatttcattcatcatagaagctacagga
cacagagtgggctacccatcttctcacacatcaaacaagaaagcgctgaagtggtctgac
tgctgtcttcctctggcatgtagtcctgggcagccattcagggcagtggctcaggccagt
gtggataacttcagtcggctgggtgtggcttttatagaggatcgccttcagctggacaat
ggacttatgccttcaaagataatccctgtcctcctccaagaatccattctctgtgagctg
ttggagaagcagcgtccaccgagcccaacaattgtgacatcagtacagctttgcagcccc
atggctgaaaagtctttgccttgtcgcctgtcagccgaccatcagctccttctgtccaat
aaaggcagcctttttctcatcccagaggcaaagcagaggttagaagagcgacgagggtca
gagccactctgtcggacccaggatctggcatctgttggtgactcagaagaccattccttg
gggaatcatcattatatggagggccatggacataacctccatctgtctaactgccatgaa
tgtttggagctcgagaaaagcaccatcctttctgtcaaatatgcttcagctgagaacatt
acagaccttcctgatgataactcagtagggctggacagtggggatgagattttggatgaa
cttcagcatgatgccaatgttttttttgatcaaagtgatggatttcaatgtaatcgcaaa
ccgccaaatattctggtgtacacgggtggttgccaggagcgttttcacgcagttcatcag
gttttatcagagtgtataaacatggaaaactacataatataccaccttctaccacagcag
gttctgagtgatccttggctggacaacaccaagctcttggtactggcagaggggcaagcc
ctgaccccccaacttcagacctgctttctcaacttccttggccagggtggcagggttctg
gggatagcctccaccttgtgcccagcaggcctctcaatggaagtcagggagagacaacgt
gggcagatctgtaggctcagctttactagggaagacagtacagagctagatttaagcgtg
ttggcaagtgggaaggtctatgtcagagatattcaaggaggaggagaggttgagctctgg
ggggagttgaaaggggacgttcctcatcagagggatatggttatcgtcaaggtaacccat
ggagaggatggcggagaagctgttgtctgtcaggtccacctggaaattgctcctgactcc
cagaatttgtcattagaaggttttgatgaattaaaggtcagcaatgcactgcgttatgaa
gtcttgacagagatccttacctcccttggcctgagttgtgaactaaaccagagtccagac
ccaagtcctgtccacctgctggccacctctcaggagaccaagaccgccttcctgaagtgg
ctgcagacacgtgcagatgaaaatggcctcctcatgttgtccaagacctgcctcagggtg
gtgtcctattgtgagctccagaatggtcctttgctgcctgaaagctgtctagccctagtc
actgactctgaagagtcccaaaggtgggagctgttcaatatggagacctacagcagaaac
ctgaagaccagagtactggggcgcactttgctgtatgctgacgttgttacatctaccatg
gacctgttggaaggacttactctgcacttaccaaaggatgtgggtttaatagctatagct
gctcgacaaagcaagggcagaggtcagtgctccagcacacacctgctcacacagcattca
aatatacctcaaatgagtaaacaattttcagttgtagtaatttttgtcttttttttttat
tcatcttatttgtcagaggttagttgggggtgtttggtaccatgtagggtccccttgtat
gttttctgtgatcctgtgtttgctgcttctgcaggtcggggtaggaatgcctggctcagt
cccttgggttgttccatgtttactctgagtgtcgaggtggacctgagctccaggctcgga
cagaggatacccttcctgcaacatctggctgctctcgctgtggttgaggctgttcggaca
cttcctggataccaggacatagacctgagggtaaagtggcccaatgacatctactacagt
aagctgatgaagctcgggggagtgctggtgacttccactgtaataggatcgacctttcat
ctgctcataggttgtgggttcaatgtgactaacagcaacccaacattgtgcatcaatgac
ctaatccggcagtacaacatacaacacaactgcaacctgcagccactaagctgtgcccag
ctcattgctcggacagttagttgtctggaggccctcatcagcagcttccaacaaggaggc
cctgaatccatcctgcccacctactacaagagatggcttcacagtgggactcgtgtgcgt
ctatggagtgaggatggaccagaggctgaagtggtgggactggaccccaatggcttcctc
caagtacacagtaaggagcagggtttggtttcggttgagcctgacggaaactcctttgac
atgatgaagaacctggtggtcatcaagcaacattag
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