Scomber scombrus (Atlantic mackerel): 133994271
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Entry
133994271 CDS
T10651
Symbol
casr
Name
(RefSeq) extracellular calcium-sensing receptor
KO
K04612
calcium-sensing receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133994271 (casr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133994271 (casr)
G protein-coupled receptors [BR:
ssco04030
]
Metabotropic glutamate receptor family
Calcium-sensing
133994271 (casr)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
NCD3G
Peripla_BP_6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
133994271
NCBI-ProteinID:
XP_062289490
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Position
14:12146147..12150842
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AA seq
940 aa
AA seq
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MRFVLYYLVLLGSSYVISTYGPRQRAQMTGDILLGGLFPIHFGVASKDQDLAARPESTQC
VRFNFRGFRWLQAMIFAIDEINNSSTLLPNITLGYRIFDTCNTVSKALEATLSFVAQNKI
DSLNLDEFCNCTDHIPSTIAVVGPAGSAVSTAVANLLGLFYIPQISYASSSRLLSNKNQY
KSFMRTIPTDEYQATAMADIIEYFEWNWVIAVASDDDYGRPGIEKFEKEMEERDICIHLN
ELISQYFEDHEIQALADRIENSTAKVIVVFASGPDIEPLIKEMVRRNITDRIWLASEAWA
SSSLIAKPEYLDVVGGTIGFVLKAGCIPGFKEFLQHVQPKKDSHNEFVREFWEETFNCYL
EDSSRLQESENGSTSFRPLCTGEEDITSVETPYLDYKHLRISYNVYVAVYSIAQALQDIL
TCTPGHGLFANNSCADIKKMEAWQVLKQLRHLNYTNSMGEKMRFDENADLAANYTIINWH
RSAEDGSVVFEEVGYYNMHTKRGAKLSIDKTKILWNGYSSEVPFSNCSEDCEPGTRKGII
DSMPTCCFECTECSDGEYSNHKDASVCTKCPNNSWSNGNHTFCFLKEIEFLSWTEPFGIA
LAICAVLGVVLTAFVMGVFVRFRNTPIVKATNRELSYVLLFSLICCFSSSLIFIGEPKDW
MCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSLHRKWWGLNLQFLLVFLCTFVQ
VMICVVWLYNAPPSSYMIHDIDEIIFITCNEGSVMALGFLIGYTCLLAAICFFFAFKSRK
LPENFTEAKFITFSMLIFFIVWISFIPAYFSTYGKFVSAVEVIAILASSFGMLACIFFNK
VYIILFKPSRNTIEEVRCSTAAHAFKVAAKATLKHSTASRKKSNSIGGYSASSPSSSISL
KTNGNDCDPPSGKHKPRVSFGSGTVTLSLSFEESRRSSLM
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttgttctgtattatctggtactgttggggtccagttatgtcatttcaacttat
ggaccccgtcagagagcacaaatgactggtgatattttgcttggaggtcttttccccata
cactttggtgttgcatccaaagaccaagaccttgcagctcgaccagaatccacacagtgt
gtcaggttcaattttcgcgggttccgttggctccaggccatgatttttgcaattgacgag
attaacaacagcagcactctcctgcccaacatcacactgggctacaggatctttgacaca
tgcaacacagtgtcaaaagccttggaggccacccttagttttgtggcccaaaataagatt
gactccttgaatttagacgaattttgcaactgcactgatcacatcccatcaaccatcgca
gtagtaggaccggctggatctgctgtctccacagctgttgcaaacttactgggtcttttt
tatattcctcagatcagctatgcctcttccagtcgcttactgagtaacaagaatcagtac
aagtccttcatgagaaccattcctacagatgagtaccaggccacagccatggcagacata
attgagtactttgaatggaactgggtcattgccgtggcctctgatgacgattatggacgc
ccagggattgagaagtttgagaaagaaatggaagagcgagacatctgcattcacctaaat
gagcttatttctcagtactttgaggatcatgaaattcaagctctggctgacagaattgag
aactccacagcaaaagtgattgttgtgtttgccagcggcccagatattgagcctctaatc
aaagagatggtcaggagaaacatcacagatcgcatctggctagccagtgaagcttgggca
agctcgtcccttattgctaaaccagagtatctcgatgttgtgggcgggactattggcttt
gttctaaaggcaggatgtatacctggctttaaagagttcttgcaacatgtccaaccaaag
aaagatagccataatgaatttgtcagggagttttgggaagaaaccttcaactgttatctt
gaagacagctcaagactccaagaaagtgagaatggcagcactagtttcaggcccttgtgt
actggtgaggaagacatcactagtgttgagaccccatacttggactacaaacaccttcga
atctcctataatgtgtatgttgcagtttattccatcgcacaggccctgcaggacatcctc
acctgcacacctggacatggactttttgctaacaattcctgtgcagatataaagaaaatg
gaggcatggcaggtcctgaagcagctgagacatttgaactacaccaacagtatgggggaa
aagatgcgcttcgatgagaacgcagacttggcagcaaactacaccattataaactggcac
aggtctgctgaagatggctctgtggtgtttgaggaggttggatactacaatatgcacact
aagagaggcgccaaactttccattgacaagacaaagatcctgtggaatggatacagttct
gaggtgccattctccaattgcagtgaagactgtgaaccaggcacaagaaaggggatcata
gacagtatgcccacatgctgctttgaatgcactgagtgctcagatggagagtacagtaat
cataaagatgccagtgtttgcaccaagtgcccaaataactcctggtccaatgggaaccat
acattctgcttcctgaaggaaatcgagtttctttcctggacagaaccattcgggatagct
ttggccatatgtgcagtgcttggtgttgtcttgacagcttttgtaatgggagtatttgtc
agatttcgcaacaccccaatagtgaaggccacaaaccgggaactatcgtacgtcctcctg
ttctcacttatctgctgcttctccagctctctcatcttcatcggagagccaaaggattgg
atgtgccgtttgcgccaacctgcctttgggatcagttttgttctgtgtatctcctgtatc
cttgtgaaaactaacagagtccttttggtttttgaagctaagatcccaacaagtctccac
cgtaaatggtggggattaaacctgcagtttcttttggtgtttctctgcacatttgtccaa
gtaatgatatgtgtggtttggctttacaacgcccctccttccagttatatgatccatgac
attgatgagataatttttatcacctgcaatgagggctctgtgatggctcttggctttctt
attggctacacctgcctcctggcagctatatgtttcttctttgcatttaaatcacgaaaa
cttccagaaaactttacagaagccaagttcatcacttttagcatgctcatattcttcatt
gtttggatctcgttcatccctgcttacttcagtacttatggcaaatttgtttcagctgtg
gaggtcattgctatactggcatccagcttcgggatgctggcctgtattttcttcaacaag
gtctacatcattctcttcaaaccctcgaggaacactattgaggaagtccgatgcagtact
gcagcccacgctttcaaagtggctgccaaagctacactaaaacatagcacagcatcaaga
aaaaagtccaacagcattggtggatattctgcctcctctccatcctcgtccatcagcctc
aagacgaatggcaatgactgtgacccaccctcaggaaagcacaagccaagggtgagcttt
ggcagtggaacagttactctgtccttgagctttgaggaatcaagaaggagttctctgatg
tga
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