Entry |
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Symbol |
trpc6a
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Name |
(RefSeq) short transient receptor potential channel 6a
|
KO |
K04969 | transient receptor potential cation channel subfamily C member 6 |
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Organism |
ssco Scomber scombrus (Atlantic mackerel)
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Brite |
KEGG Orthology (KO) [BR:ssco00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:ssco04040]
133994422 (trpc6a)
Ion channels [BR:ssco04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133994422 (trpc6a)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
14:complement(13143483..13155102)
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AA seq |
880 aa
MNHRTVNLNSRPAGYIDSPRARSRDNLLMYDDFGEENCCSGRCLGHSSSERQLMARVNAA
KRRQALRGPAYMFSAPSISLSDVEQRLLEAAEYGNIPEVRRMLVHVPNLNVNAVDYMGQN
ALQLAVANEHLEVAELLLGRADLARVGDALLLAISKGYVRITEAVLSHRSFRDANRLTAS
PAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFCGCD
SCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLANIEKEFKN
DYCCLSSQCKDYVVGLLDLCRSTEEVEAILSGETDSEDNYDPPGRPSLTRLKLAIKYELK
KFVAHPNCQQQLLSIWYENLPGLRQQTTATKLLVVLGVAMSLPGLAVAYWVAPCSRVGKV
MRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLANMTHHHIPGGYQLNSDPLLLYRM
TTTPFTWMEILIISWVMGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSCRFS
ALRHADLAQTYVHTHYKTLLNVTLPPEIHYFTLARIHWLPSDPQLVSEGLYAVAVVLSFS
RIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAKQNDAF
TTLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMIN
SSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLSKGIKSLLLHYM
AGQSEEKTETQLNKLGEGKSSGYGDSTSPSRYQKIMKRLIKRYIIKAQADRESDEITEGE
LKEIKQDISSLRYELLEEKSQTMETMDGLLRRLEEMNIPS |
NT seq |
2643 nt +upstreamnt +downstreamnt
atgaaccacagaaccgttaatctcaacagccgacctgcaggttacattgacagccccagg
gccaggagccgagataacctattaatgtacgatgattttggagaggagaactgttgctct
ggacgatgccttggccacagcagctccgagagacaactcatggctcgtgtcaacgctgct
aagagacgccaggctcttcgtggtcctgcctacatgttctccgctccttcaatcagcctg
tcagatgttgagcaacgtctcctggaggcagctgaatacggaaacataccggaggtgcgc
cgtatgcttgtccatgtacccaacttgaatgtcaacgctgtggactacatgggccagaat
gctttgcagctagctgtagccaacgaacacctggaggtggcggagctgttgctggggagg
gcggatttggccagagtgggtgatgccctcctgctagccatcagtaaaggttatgttcgt
atcacagaggccgtgctgagtcaccgttcatttagagatgccaatcgcctgacagcgagc
cctgctcaagtagacatgttggatgacttctacgcttatgatgaggacgggacaaggttt
tcccatgatgtgactccagtgatccttgcagctcactgccaagaatacgagattgttcac
accctgctgagtaaaggtgcccgcatcgacccccctcacgactacttctgtggctgcgac
tcctgtaactaccagcagcagtttgactccttcagccactcgcgatcgaggatcaatgct
tacagaggactcgccagtcccgcttacctatccctgtccaacgaggatccagtgctggca
gcgctggagctcagcaatgaactggccatgttggccaatattgagaaagagtttaagaat
gactactgctgtctgtcgagtcagtgtaaggactatgtggtgggccttctggatctgtgt
cgcagcacagaggaggttgaggccatactgagcggagaaactgactccgaagacaactat
gatccaccaggccgcccctccctcacacggctcaaattagccatcaaatacgagctcaaa
aagtttgtggctcatcctaactgccagcagcagctgctgagtatctggtatgagaatctg
cccggcttgagacaacaaaccactgctaccaaactgctggtggtgctgggggtggctatg
agtttgcctgggctggctgtggcttactgggtagctccatgcagcagagtgggaaaggtg
atgcgcagccccttcatgaagtttgtggcccatgcttcatctttcacaatcttcctgggt
cttctgatcctgaatgcagctgaccgttttgcaggcacaacgctgttggccaacatgacc
caccatcacatcccaggaggataccaactcaactctgacccgctgctgctctaccgaatg
accacgacacctttcacttggatggagatactcatcatttcatgggtcatgggtatgatc
tgggctgaggtgaaggagatctggagtcaagggccgggggagtaccttgtggaaccgtgg
aacttcctggactttgggatgctggcgatctttctcgcctccttcagctgccgcttttct
gctctgagacatgccgacttagcccagacctatgtacacacacactacaaaacactgctt
aatgtcacactgccgcctgaaatacactacttcacactggcacggatccactggttgccg
tcagaccctcagctggtatcagaaggcctgtacgcagtcgcagtggtgctgagcttctct
cgcattgcttacatcctcccggccaatgagagcttcggcccactgcagatctctttgggg
agaaccgtcaaggacatcttcaagttcatggtcatcttcatcttggtcttcttggcgttc
atgattggcatgttcaacctgtactcctactacctgggggcaaagcagaatgacgccttc
accaccctagaggagagcttcaagacgttgttctgggctatatttggactgtccgaggtc
aggtctgtcgtgatcaacaacggacacaaattcatcgagaacattggctatgttttgtac
ggggtttacaatgttaccatggtgattgtgctgctcaacatgctcatcgccatgattaac
agctccttccaggagattgaggatgatgccgatgtagagtggaagtttgctcgggccaaa
ctctggttctcctactttgaggagggacgaacgctccctgtgccctttaacctggtgccc
agtcccaaatctatgctgggcctgtccaaaggaattaagtccctgctcctgcactacatg
gcaggacaaagcgaggagaaaacagagacacagctcaacaagcttggagaaggaaaaagt
tcaggatatggtgattcaacgagcccttccagatatcagaagatcatgaagcgactgata
aaacgttacatcatcaaagcccaagcagacagagagagtgatgagataactgaaggtgag
ttgaaggaaatcaagcaggacatctcaagtctgcgatatgaactactggaggagaaatca
cagactatggagacaatggacggactgctgcgtcggctggaggagatgaacataccttca
tag |