KEGG   Scomber scombrus (Atlantic mackerel): 133994422
Entry
133994422         CDS       T10651                                 
Symbol
trpc6a
Name
(RefSeq) short transient receptor potential channel 6a
  KO
K04969  transient receptor potential cation channel subfamily C member 6
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ssco04040]
    133994422 (trpc6a)
Ion channels [BR:ssco04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   133994422 (trpc6a)
SSDB
Motif
Pfam: TRP_2 Ion_trans PKD_channel Ank_2 Ank_4 Ank Ank_5 YVC1_C DUF6744 DUF3837
Other DBs
NCBI-GeneID: 133994422
NCBI-ProteinID: XP_062289659
LinkDB
Position
14:complement(13143483..13155102)
AA seq 880 aa
MNHRTVNLNSRPAGYIDSPRARSRDNLLMYDDFGEENCCSGRCLGHSSSERQLMARVNAA
KRRQALRGPAYMFSAPSISLSDVEQRLLEAAEYGNIPEVRRMLVHVPNLNVNAVDYMGQN
ALQLAVANEHLEVAELLLGRADLARVGDALLLAISKGYVRITEAVLSHRSFRDANRLTAS
PAQVDMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLSKGARIDPPHDYFCGCD
SCNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAMLANIEKEFKN
DYCCLSSQCKDYVVGLLDLCRSTEEVEAILSGETDSEDNYDPPGRPSLTRLKLAIKYELK
KFVAHPNCQQQLLSIWYENLPGLRQQTTATKLLVVLGVAMSLPGLAVAYWVAPCSRVGKV
MRSPFMKFVAHASSFTIFLGLLILNAADRFAGTTLLANMTHHHIPGGYQLNSDPLLLYRM
TTTPFTWMEILIISWVMGMIWAEVKEIWSQGPGEYLVEPWNFLDFGMLAIFLASFSCRFS
ALRHADLAQTYVHTHYKTLLNVTLPPEIHYFTLARIHWLPSDPQLVSEGLYAVAVVLSFS
RIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAKQNDAF
TTLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMIN
SSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSMLGLSKGIKSLLLHYM
AGQSEEKTETQLNKLGEGKSSGYGDSTSPSRYQKIMKRLIKRYIIKAQADRESDEITEGE
LKEIKQDISSLRYELLEEKSQTMETMDGLLRRLEEMNIPS
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgaaccacagaaccgttaatctcaacagccgacctgcaggttacattgacagccccagg
gccaggagccgagataacctattaatgtacgatgattttggagaggagaactgttgctct
ggacgatgccttggccacagcagctccgagagacaactcatggctcgtgtcaacgctgct
aagagacgccaggctcttcgtggtcctgcctacatgttctccgctccttcaatcagcctg
tcagatgttgagcaacgtctcctggaggcagctgaatacggaaacataccggaggtgcgc
cgtatgcttgtccatgtacccaacttgaatgtcaacgctgtggactacatgggccagaat
gctttgcagctagctgtagccaacgaacacctggaggtggcggagctgttgctggggagg
gcggatttggccagagtgggtgatgccctcctgctagccatcagtaaaggttatgttcgt
atcacagaggccgtgctgagtcaccgttcatttagagatgccaatcgcctgacagcgagc
cctgctcaagtagacatgttggatgacttctacgcttatgatgaggacgggacaaggttt
tcccatgatgtgactccagtgatccttgcagctcactgccaagaatacgagattgttcac
accctgctgagtaaaggtgcccgcatcgacccccctcacgactacttctgtggctgcgac
tcctgtaactaccagcagcagtttgactccttcagccactcgcgatcgaggatcaatgct
tacagaggactcgccagtcccgcttacctatccctgtccaacgaggatccagtgctggca
gcgctggagctcagcaatgaactggccatgttggccaatattgagaaagagtttaagaat
gactactgctgtctgtcgagtcagtgtaaggactatgtggtgggccttctggatctgtgt
cgcagcacagaggaggttgaggccatactgagcggagaaactgactccgaagacaactat
gatccaccaggccgcccctccctcacacggctcaaattagccatcaaatacgagctcaaa
aagtttgtggctcatcctaactgccagcagcagctgctgagtatctggtatgagaatctg
cccggcttgagacaacaaaccactgctaccaaactgctggtggtgctgggggtggctatg
agtttgcctgggctggctgtggcttactgggtagctccatgcagcagagtgggaaaggtg
atgcgcagccccttcatgaagtttgtggcccatgcttcatctttcacaatcttcctgggt
cttctgatcctgaatgcagctgaccgttttgcaggcacaacgctgttggccaacatgacc
caccatcacatcccaggaggataccaactcaactctgacccgctgctgctctaccgaatg
accacgacacctttcacttggatggagatactcatcatttcatgggtcatgggtatgatc
tgggctgaggtgaaggagatctggagtcaagggccgggggagtaccttgtggaaccgtgg
aacttcctggactttgggatgctggcgatctttctcgcctccttcagctgccgcttttct
gctctgagacatgccgacttagcccagacctatgtacacacacactacaaaacactgctt
aatgtcacactgccgcctgaaatacactacttcacactggcacggatccactggttgccg
tcagaccctcagctggtatcagaaggcctgtacgcagtcgcagtggtgctgagcttctct
cgcattgcttacatcctcccggccaatgagagcttcggcccactgcagatctctttgggg
agaaccgtcaaggacatcttcaagttcatggtcatcttcatcttggtcttcttggcgttc
atgattggcatgttcaacctgtactcctactacctgggggcaaagcagaatgacgccttc
accaccctagaggagagcttcaagacgttgttctgggctatatttggactgtccgaggtc
aggtctgtcgtgatcaacaacggacacaaattcatcgagaacattggctatgttttgtac
ggggtttacaatgttaccatggtgattgtgctgctcaacatgctcatcgccatgattaac
agctccttccaggagattgaggatgatgccgatgtagagtggaagtttgctcgggccaaa
ctctggttctcctactttgaggagggacgaacgctccctgtgccctttaacctggtgccc
agtcccaaatctatgctgggcctgtccaaaggaattaagtccctgctcctgcactacatg
gcaggacaaagcgaggagaaaacagagacacagctcaacaagcttggagaaggaaaaagt
tcaggatatggtgattcaacgagcccttccagatatcagaagatcatgaagcgactgata
aaacgttacatcatcaaagcccaagcagacagagagagtgatgagataactgaaggtgag
ttgaaggaaatcaagcaggacatctcaagtctgcgatatgaactactggaggagaaatca
cagactatggagacaatggacggactgctgcgtcggctggaggagatgaacataccttca
tag

DBGET integrated database retrieval system