Scomber scombrus (Atlantic mackerel): 133994982
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Entry
133994982 CDS
T10651
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133994982
04081 Hormone signaling
133994982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133994982
G protein-coupled receptors [BR:
ssco04030
]
Rhodopsin family
Peptide
Thyrotropin
133994982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_5
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
133994982
NCBI-ProteinID:
XP_062290206
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All DBs
Position
15:29239093..29247219
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AA seq
724 aa
AA seq
DB search
MNVYLNLLFFIFIPVEVTLPLEYCPTHCQCDWDIHSVTCFGTEVMPDFHASTKEVWLVET
KLSSIPQNAFANLANISQIYISDDDTLRYLERHSFYNLSWVTHIQLTAIKTLSYIDPEAF
KDLPNLKYLGITNTGLTSFPGLQYIQSTQEDFILEIVENVFIEVIPANSFRGISENSLTI
MLNSNGVKEIQRYAFNGSRLEQVYLHRNVDLERIDEFAFYGVIHGPLHLDLSETKVSSLP
SIGMKTIEKLQAKNTWTLKVLPPFRAFHHLQSAELTFQSHCCGLKMLKRWRGHSEAVICN
LTWNALGKQHESSAGFSKKIYQHLRDSFALQTAGSTTHIYHYHDAICPNEQSQNEGLFNV
ELPAKYPHEDFDFAPCNELQAENHRLLCSPMPDAFNPCEDVMSQSFLKVLVWVVSLLAIS
ANLLVMFILLTSRQKLSITRFLMGHLVFADFCMGIYLLLIASVDMYTRSHYYQYAIAWQT
GTGCNLAGTISLFASELSVYTLTLISLQRWHAIFYAMRPDKKLRLRHAVALMLVGWLLCV
IIALLPVIGVSSYQKVSICLPMDTETAAAWVYVVSVLMVNVIAVIVVCLCYIHIYCMVHN
PQHQSSQCDTIMAKRMAILIFTNFLCLAPICFYGLSATLHQPLITITDSKVLLVLFYPLN
SCAHPFFYAILTKAFHRDILMLLSRMGLCQQQAHLYRSQFVSINPQICRQCLPCIPAPHH
EMPK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttatttgaatctcctttttttcattttcatccccgttgaggtcactttacct
ctggaatattgtccaactcattgccagtgtgactgggacatccacagtgtgacatgtttt
gggactgaggtcatgcctgatttccatgccagcacaaaggaggtgtggcttgtggaaaca
aaactctcttccattcctcagaatgcctttgccaacttggccaacatttctcaaatatac
atctctgatgatgacaccttaagatatcttgaaaggcattctttctacaacctgtcttgg
gtcacccacatacaacttactgccatcaaaacactgtcatacattgacccagaggcattt
aaggatctgcctaatttaaagtaccttgggatcaccaacacaggtctcacttcttttcct
ggactacagtatattcagtccacacaagaggattttattttggagatagtggagaacgtc
ttcattgaagtcatacctgctaattcttttaggggaatatctgagaattctctgaccatc
atgctgaatagtaatggtgtgaaagagattcagcgctatgccttcaacgggagcagactg
gaacaagtgtatcttcacagaaatgtggatttggagcgaatagatgaatttgcattttat
ggtgtaattcacggcccacttcacttagacctctcagaaaccaaagttagctctttgcct
tcaataggtatgaagaccattgaaaagcttcaagctaaaaacacttggaccctcaaagta
ctcccccccttcagagcatttcaccatttacagagtgctgaattgaccttccaaagccat
tgttgtggtctcaaaatgttgaaaagatggagaggacactctgaggcagttatttgcaac
ttgacctggaatgctttgggaaagcagcatgaatcatctgcaggtttctctaagaaaatc
tatcaacatctaagagacagcttcgctctccaaactgctggcagcacaactcacatttat
cactaccatgacgccatttgcccaaatgaacagtctcaaaatgagggtttgtttaatgtt
gagctaccagcaaaatatccccatgaagattttgactttgcaccatgtaatgaactccag
gcagaaaatcatcgactcttatgcagccccatgcctgatgccttcaacccctgtgaagat
gtgatgagtcaaagcttcctcaaagtcttggtctgggtggtcagtctgttagccatttca
gccaacctcctggtgatgttcattctgttgaccagccgacagaagttgtcaattacccgt
ttcctcatgggtcacctggtttttgcagatttctgtatggggatatacttgctgctcatt
gcatctgtcgacatgtacacgcgctcccattattaccagtatgctattgcctggcaaaca
gggactggctgcaatctagcagggacaatatcattgtttgccagtgaactatctgtgtac
acattaacattaataagccttcagcgctggcatgccatcttctacgcaatgaggccagac
aaaaaattgaggttacgccatgcagttgcattgatgctcgtcggttggttgttgtgtgta
atcatagcactgctgccagtaattggtgtgagcagttaccagaaagtgagcatctgctta
cctatggatactgagacagctgctgcatgggtgtatgtggtttctgtcctgatggttaat
gtcattgctgttatagtagtgtgtttgtgttatatccacatctactgtatggtgcacaat
ccccagcatcagtccagccaatgtgataccatcatggccaaacgtatggcaattctcata
ttcaccaacttcctgtgcctggctcccatttgcttctacggcttgtctgcaactctgcac
caaccactgatcaccatcacagattccaaggtgctgctggtgctgttctatcctctgaac
tcttgtgcacacccatttttttatgctatcctcacaaaagcatttcacagagacatcctg
atgttgttgagccggatgggactatgccagcaacaagcacacctctatagaagccagttt
gtcagtattaatccccagatatgcagacagtgtctgccatgcattccagcaccacaccat
gaaatgcccaagtaa
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