KEGG   Scomber scombrus (Atlantic mackerel): 133995158
Entry
133995158         CDS       T10651                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082  ATP-dependent chromatin remodeling
ssco04145  Phagosome
ssco04210  Apoptosis
ssco04510  Focal adhesion
ssco04520  Adherens junction
ssco04530  Tight junction
ssco04810  Regulation of actin cytoskeleton
ssco04814  Motor proteins
ssco04820  Cytoskeleton in muscle cells
ssco05100  Bacterial invasion of epithelial cells
ssco05132  Salmonella infection
Brite
Transcription machinery [BR:ssco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     133995158 (actb1)
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     133995158 (actb1)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     133995158 (actb1)
    NuA4 complex
     133995158 (actb1)
  Chromatin remodeling factors
   BAF complex
    133995158 (actb1)
   PBAF complex
    133995158 (actb1)
   GBAF(ncBAF) complex
    133995158 (actb1)
   SWR1 complex
    133995158 (actb1)
Mitochondrial biogenesis [BR:ssco03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    133995158 (actb1)
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     133995158 (actb1)
Exosome [BR:ssco04147]
 Exosomal proteins
  Proteins found in most exosomes
   133995158 (actb1)
SSDB
Other DBs
NCBI-GeneID: 133995158
NCBI-ProteinID: XP_062290460
LinkDB
Position
2:complement(27676485..27680305)
AA seq 375 aa
MEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagacgaaatcgccgccctcgttgttgacaatggatccggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtcttcccctccattgttggacgtcccaggcat
cagggtgtgatggttggcatgggccagaaagacagctatgttggagatgaggcacagagc
aaaaggggtatcctgaccctgaagtatcccattgagcacggtattgtcaccaactgggat
gacatggagaagatctggcatcacaccttctacaatgagcttagggttgcccctgaggag
cacccagtcctgctcacagaagcccccctcaaccccaaggctaacagggaaaagatgacc
cagatcatgtttgagaccttcaacactcctgccatgtatgtggccattcaggctgtgctg
tccctgtatgcctctggtcgtaccactggtattgttatggactctggtgatggtgtgacc
cacacagtgcccatctatgaaggctacgccctgccccatgccatcctcaggttggacctg
gctggcagggacctcacagactacctcatgaagatcctgactgagaggggttacagcttc
accaccacagctgagcgtgaaatcgtgcgtgacatcaaggagaagctctgttatgttgca
ctggactttgagcaagaaatgggcactgctgcctcctcttcatccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggaaacgagaggttccgttgcccagaggcc
ctcttccagccctctttccttggtatggagtcttgcggtatccatgaaaccaccttcaac
agcatcatgaagtgcgacgttgacatccgtaaggacctatacgctaacactgtgctgtct
ggcggtaccaccatgtaccctggcatcgctgaccgtatgcagaaggaaatcactgccctg
gcacccaccaccatgaagatcaagatcattgctcccccagagaggaagtactctgtatgg
attggtggctccatcctggcttccctgtccactttccagcagatgtggatcagcaagcag
gagtacgatgagtccggccccagcattgtccacaggaagtgcttctaa

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