Scomber scombrus (Atlantic mackerel): 133996489
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Entry
133996489 CDS
T10651
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04218
Cellular senescence
ssco04514
Cell adhesion molecules
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133996489
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996489
04145 Phagosome
133996489
09143 Cell growth and death
04218 Cellular senescence
133996489
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133996489
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996489
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133996489
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133996489
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Antigens
133996489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
MHC_I_3
OppC_N
CD34_antigen
Ni_hydr_CYTB
DUF4064
MC_hydratase
Motif
Other DBs
NCBI-GeneID:
133996489
NCBI-ProteinID:
XP_062292059
LinkDB
All DBs
Position
16:4995098..5019066
Genome browser
AA seq
369 aa
AA seq
DB search
MKILVFLVLLGLHSAAAGIHSLKYIITVSSQVPNFPEFVIVAMLDDVQIYHYDSNTRRLE
PKQDWMNRVIEDDPQFWESHTARGLGYHQLFKDYIETLKQRFNQTGGIHVFQWVGGCEWD
HETGEVNGFRQVGYDGEDFLSWDVKTNTWIAPKQQAVITKNSWNNDKAQLAYYKHTINQE
LPYWLKMLMNYGRSSLMRTELPSVSLLQKTPSSPVSCFATGFYPDRAEIFWRKDGEELHE
DVELGEILPNHDGSFQMSVELDLSSVTPEDWRRYECVFHLSGVKDNIITKLDKTAIQTNW
SKTGDGRDGGSSGFPLVAVIGGVVVLLLLVVGITGYFLWKKNKKGKEGFKPASTSDSSSE
NSQQINLKT
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttggtttttctggtcctcctgggtctacacagcgcagcagcagggattcac
tctctgaagtatatcatcactgtgtcctctcaagtcccaaacttcccagagtttgtgatt
gttgcaatgctcgatgatgttcagatatatcactatgacagcaacaccaggagactagaa
cccaaacaggactggatgaacagagtcatagaagatgatccacagttctgggagagccac
actgccagaggattgggttaccatcagctcttcaaagactacattgaaactttaaagcag
cgcttcaaccaaactggaggtatccatgtttttcagtgggtgggtggctgtgaatgggat
catgagactggagaggttaatggattcagacaggttggttacgatggagaagacttcctg
tcgtgggatgtgaagacaaatacatggatcgctccaaaacaacaggctgttatcaccaaa
aacagttggaacaatgacaaagcacagctagcatattataagcacaccatcaaccaggag
ttaccttactggctgaagatgttaatgaactatgggaggagctctctgatgagaacagag
cttccctcagtgtctctcctccagaagactccctcctctccagtcagctgcttcgctaca
ggtttctaccctgacagagccgagatattctggaggaaagatggagaggagcttcatgag
gacgtggaacttggagagatcctccccaaccatgatggatccttccagatgagtgttgag
ctggacctttcatcagtcacacctgaagactggaggaggtacgaatgtgtgtttcatctc
tctggtgtgaaggacaacatcatcaccaaactggataaaacagcaattcagacaaactgg
agcaagactggtgatggaagagatggaggttcttcaggtttccctcttgttgctgttatt
ggaggtgttgttgtactgctgctcctggtagtcggcatcactggatacttcctctggaag
aagaacaagaagggaaaggaagggtttaaacctgccagcacttctgacagcagctctgaa
aactctcagcaaattaatctaaaaacctga
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integrated database retrieval system
