Scomber scombrus (Atlantic mackerel): 133996490
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Entry
133996490 CDS
T10651
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04218
Cellular senescence
ssco04514
Cell adhesion molecules
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133996490
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996490
04145 Phagosome
133996490
09143 Cell growth and death
04218 Cellular senescence
133996490
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133996490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996490
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133996490
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133996490
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Antigens
133996490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
TspO_MBR
CD34_antigen
SpoIIIAH
Ig_3
OppC_N
DUF5385
DUF4064
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
133996490
NCBI-ProteinID:
XP_062292061
LinkDB
All DBs
Position
16:complement(5618599..5632558)
Genome browser
AA seq
355 aa
AA seq
DB search
MKILVFLALLGLHSAAGVTHSLKYFYTASSQVPNFPEFVAFGLVDDIQIDHYDSNTERKV
PKQGWMNKVTEDDPQYWERNTDVLKGHQQTFKVNIETVKQRFNQTGGAHIVQWMYGCEWD
DETGEVDGYEQFGYDGEDFIVLNLKTETWIAPKQQAEITKRKWDNDKAYNAQKKNYLTQI
CVDWLKKYVNYGRSSLMRTELPSTHSLLQKTPSSPVSCFATGFYPDRVMMFWRKDGVELH
EDVERGEILPNHDGSFQMSVKLDVSSIAPEDWRRYECVFQLSGVKDDIIINLDEIRKPGF
PLGAVIGVVVVLLLLVVGIAGYFIWKKNKKGKEGFKPANTSDSGSDNSQQEIPKA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttggtttttcttgccctcctgggtctacacagcgcagcgggagtgactcac
tctctgaagtatttctacactgcgtcctctcaagtcccaaacttcccagagtttgtggct
tttggattggttgatgatattcagattgatcactatgacagcaacactgagagaaaggta
cccaaacagggctggatgaacaaagtcacagaagatgatccacagtactgggagagaaac
actgatgtccttaagggtcaccagcagaccttcaaggtcaacattgaaactgtgaagcag
cgcttcaaccaaactggaggtgcccacattgtccagtggatgtacggctgtgaatgggac
gatgagactggagaggttgatggttatgaacagtttggttatgatggagaagacttcata
gtactcaatctgaagacagagacatggatcgctccaaaacaacaggctgaaatcaccaaa
cggaagtgggacaatgacaaagcttacaacgcacagaagaagaactacctcacccagatt
tgcgttgactggctgaagaagtatgtgaactatgggaggagctctctgatgagaacagag
cttccctccacacattctctcctccagaagactccctcctctccagtcagctgcttcgct
acaggtttctaccctgacagagtcatgatgttctggaggaaagatggagttgagcttcat
gaggacgtggaacgtggagagatcctccccaaccatgatggatccttccagatgagtgtt
aagctggacgtttcatcaatcgcacctgaagactggaggaggtacgaatgtgtgtttcag
ctctctggtgtgaaggacgacatcatcatcaatctggatgaaataagaaagcctggtttc
cctcttggtgctgttatcggagttgttgttgtactgctgctcctggtagtcggcatcgct
ggatacttcatctggaaaaagaacaagaagggaaaggaagggttcaaacctgccaacact
tctgacagcggctccgacaactctcagcaagagattccaaaagcctga
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integrated database retrieval system
