Scomber scombrus (Atlantic mackerel): 133996696
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Entry
133996696 CDS
T10651
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04218
Cellular senescence
ssco04514
Cell adhesion molecules
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133996696
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996696
04145 Phagosome
133996696
09143 Cell growth and death
04218 Cellular senescence
133996696
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133996696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996696
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133996696
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133996696
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Antigens
133996696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
MHC_I_2
MHC_II_alpha
Motif
Other DBs
NCBI-GeneID:
133996696
NCBI-ProteinID:
XP_062292296
LinkDB
All DBs
Position
16:3257612..3266118
Genome browser
AA seq
318 aa
AA seq
DB search
MYLIAVFVLLGTGLTVNCEIHSLKYIYTAFSKPVGLPGIHEFTAMGQLDGRMIDYYDSDK
KEKVPKQDWMKERLPAEYWDKGTKSRLRKQQWFNDSIDILKKQMNQTDDDLHVLQWMVGC
EGETGPDGLFTFRRGVYMFNYDDQDFLFFDGANSIWVAANHIAGLTKRKWNESQILKDYI
KLYLEHICIQWLDNFRTYGKKQLDAASPPDVYVFAKKTRIEANLMLTCLATGFYTKDITL
NFRRNDRILTKEDGLISSGVRPNEDDTFQRRDSVEILKSDISSFTCEVIHRASNLSVKKD
WGKKLSYFSLQFVTVQQS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtatcttattgcagtgttcgtccttttggggacgggactgacagtaaactgcgagatt
cactccctcaagtacatctacaccgccttctccaaacctgtcggacttccgggcattcat
gagttcacagctatgggtcagctggacggcaggatgatcgactactatgacagtgataaa
aaggaaaaagttcccaagcaggactggatgaaagagcgacttcctgcagagtactgggac
aaaggcacaaagtcccgcctcagaaagcagcagtggttcaatgacagtatcgacatcctg
aagaaacaaatgaatcagaccgatgatgatctccatgttcttcagtggatggttggctgt
gagggtgaaacagggcctgatggcttatttacgtttcgccgtggtgtgtacatgttcaac
tacgatgatcaagacttcctgttctttgatggcgccaactcaatatgggttgctgcaaat
catatagcaggcctgaccaagagaaagtggaatgaatcccagattctaaaagattacatc
aaactctacctcgagcacatttgtatacagtggttggacaacttcaggacatatgggaaa
aaacagctggacgctgcctctccaccagatgtgtacgtgtttgccaagaaaaccagaatt
gaggcaaacctcatgttgacctgcctggccaccggtttctacacaaaagacatcaccctt
aacttcagaaggaacgaccgcattctgactaaagaggacgggttgatctcctcaggcgtt
cgaccaaatgaagacgacaccttccagagaagagacagtgtggagattttaaagagtgac
atttcttcattcacatgtgaagtcattcacagagcatctaatctatctgttaagaaggat
tggggtaagaaactttcttatttcagtttacagttcgtcacagtgcaacaaagttga
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