Scomber scombrus (Atlantic mackerel): 133996894
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Entry
133996894 CDS
T10651
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04218
Cellular senescence
ssco04514
Cell adhesion molecules
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133996894
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996894
04145 Phagosome
133996894
09143 Cell growth and death
04218 Cellular senescence
133996894
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133996894
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996894
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133996894
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133996894
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Antigens
133996894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
OppC_N
Motif
Other DBs
NCBI-GeneID:
133996894
NCBI-ProteinID:
XP_062292394
LinkDB
All DBs
Position
16:5031462..5042605
Genome browser
AA seq
347 aa
AA seq
DB search
MKILDFLVLLGLHSAAAVIHSMKNFFTVSSQVPNFPEFVAVGMVDDVQIYHYDSKTRRLE
PKQDWMNRVAEDDPQFWKSYTAICLGYHQLFKGYIETLKHRFNQTGGVHIFQWLVGCEWD
DESGEVNGFRQVGYDGEDFLSWDVKTNTWIAPKQQAVITKNNWNNDKVLMAYYKYTITQE
LPYWLQKLMMYGRSSLMRTELPSVSLLQKTPSSPVSCFATGFYPDRAEIFWRKDGEELHE
NVELGEILPNHDGSFQMSVDLDLSSVTPEDWRRYECVFHLSGVKDDIITKLDKTAIQTNW
GKTGDGRDGGPSGFPLGAVIGGVVVLLLLVVGIVGFFLWKKNNNCER
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttggattttctggtcctcctgggtctacacagcgcagcagcagtgattcac
tctatgaagaatttcttcactgtgtcctctcaagtcccaaacttcccagagtttgtggct
gttgggatggttgatgatgttcagatatatcactatgacagcaaaaccaggagactagaa
cccaaacaggactggatgaacagagtcgcagaagatgatccacagttctggaagagctac
actgccatatgtttgggttaccatcagctcttcaaaggttacattgaaactttaaagcat
cgtttcaaccaaactggaggtgtccatattttccagtggctggttggttgtgaatgggac
gatgagtctggagaggttaatggtttcagacaggttggttacgatggagaagacttccta
tcgtgggatgtgaagacaaatacatggatcgctccaaaacaacaggctgtcatcaccaaa
aacaattggaacaatgacaaagtacttatggcatattataagtacaccatcacccaggag
ttaccttactggctgcagaagttaatgatgtatgggagaagctctctgatgagaacagaa
cttccctcagtgtctctcctccagaagactccctcctctccagtcagctgcttcgctaca
ggtttctaccctgacagagccgagatattctggaggaaagatggagaggagcttcatgag
aacgtggaacttggagagatcctccccaaccatgatggatccttccagatgagtgttgac
ctggacctttcatcagtcacacctgaagactggaggaggtacgaatgtgtgtttcatctc
tctggtgtgaaggacgacatcatcaccaaactggacaaaacagcgattcagacaaactgg
ggcaagactggtgatggaagagatggaggtccttcagggttccctcttggtgctgtcatc
ggaggtgttgttgtactgctgctcctggtagtcggtatcgttggattcttcctctggaag
aagaacaataattgtgagagataa
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integrated database retrieval system
