Scomber scombrus (Atlantic mackerel): 133996897
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Entry
133996897 CDS
T10651
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04145
Phagosome
ssco04218
Cellular senescence
ssco04514
Cell adhesion molecules
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133996897
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133996897
04145 Phagosome
133996897
09143 Cell growth and death
04218 Cellular senescence
133996897
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133996897
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133996897
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
133996897
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133996897
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ssco00537
]
Antigens
133996897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
DUF7234
Ni_hydr_CYTB
Motif
Other DBs
NCBI-GeneID:
133996897
NCBI-ProteinID:
XP_062292397
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All DBs
Position
16:5075602..5079661
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AA seq
346 aa
AA seq
DB search
MKILDFLVLLGLHSAAAVIHSLKYIFTVSSQVPNFPEFVAVAMVDDVQISHYDSITKKAE
PKQDWMNRVTEDDPHYWEGHTAICLGYHQLFKGYIETFKHCFNQTGGVHILQWVVGCDWN
DETGEFNGFRQVGYDGEDFLSWDVKTNTWIARKQQAVITKNNWNNDKERLALYKYSITQE
FPDLLKKLLKYGKSSLMRTELPSVSLLQKTPSSPVSCFATGFYPDRAEIFWRKDGEELHE
DVELGEILPNHDGSFQMNVDLNLSLVTPEDWRRYECVFQLSCVNDDIITKLDKTAIQTNW
SKTGFPLGAVVGPVVVLLLLVVGITGYFLWKKNNNGFQPANTSDTL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttggattttctggtcctcctgggtctacacagcgcagcagcagtgattcac
tctctgaagtatatcttcactgtgtcctctcaagtcccaaacttcccagagtttgtggct
gttgcaatggttgatgatgttcagattagtcactatgacagcatcaccaagaaagcagaa
cccaaacaggactggatgaacagagtcacagaagatgatccacactactgggaagggcac
actgccatatgtttgggttaccatcagctcttcaaaggttacattgaaactttcaagcat
tgtttcaaccaaactggaggtgtacacattctccagtgggtggttggctgtgactggaac
gatgagactggagagtttaacggattcagacaggttggttacgatggagaagacttccta
tcgtgggatgtgaagacaaatacatggatcgctcgaaaacaacaggctgttatcaccaaa
aacaattggaacaatgacaaagaacggttggcattatataagtactccatcacccaggag
ttccctgacttgctgaagaagttattgaagtacgggaagagctctctgatgagaacagag
cttccctcagtgtctctcctccagaagactccctcctctccagtcagctgcttcgctaca
ggtttctaccctgacagagccgagatattctggaggaaagatggagaggagcttcatgag
gacgtggaacttggagagatcctccccaaccatgatggatcctttcagatgaatgttgac
ctgaacctttcattagtcacacctgaagactggaggaggtacgaatgtgtgtttcagctc
tcttgtgtgaatgacgacatcatcaccaaactggacaaaacagcgattcagacaaactgg
agcaagactgggttccctcttggtgctgtcgttggacctgttgttgtactgctgctcctg
gtagtcggcatcactggatacttcctctggaaaaagaacaataatggatttcaacctgcc
aacacctcagacactttgtaa
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integrated database retrieval system
