Scomber scombrus (Atlantic mackerel): 133997076
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Entry
133997076 CDS
T10651
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00512
Mucin type O-glycan biosynthesis
ssco00533
Glycosaminoglycan biosynthesis - keratan sulfate
ssco00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ssco00604
Glycosphingolipid biosynthesis - ganglio series
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
133997076
00533 Glycosaminoglycan biosynthesis - keratan sulfate
133997076
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
133997076
00604 Glycosphingolipid biosynthesis - ganglio series
133997076
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133997076
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
133997076
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
133997076
Glycosyltransferases [BR:
ssco01003
]
Terminal extension
Sialyltransferase
133997076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
dGTP_diPhyd_N
Motif
Other DBs
NCBI-GeneID:
133997076
NCBI-ProteinID:
XP_062292616
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All DBs
Position
16:complement(23070224..23093618)
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AA seq
334 aa
AA seq
DB search
MSLPKRRKFRTFALLFCVITFTTFLFSYTFRDPSFYFLKQALHLSDNFFSKGLCACQQCM
TELEDDPWFTEHFNQSIHPLMTRENSVLSDETFKWWQWLQSERQPANFTEVVEELFQVIP
DEVLFMDASPERCRTCSVVGNSGNLKGSQYGRIIDSSDFIIRMNQAPTAGFEEDVGARTT
LHVMYPESAIDLDNTTSLVLIPFKTLDLQWLISALTTGNIKHTYIPVISRIKANKDKVLI
YSPTFFKYVYESWLEGHGRYPSTGFLSLLLAVHICDEVRVFGFGADQYGNWHHYWEENHL
AGAFRHTGVHDGDYEYNVTLLLADKHKIRMFKGR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacccaagcggaggaaattcaggacttttgctctgttgttttgtgtcattaca
tttacgacgttcctgttcagctacactttccgggacccgtcgttctatttcctcaagcaa
gctctccacttgtcagacaactttttctccaaagggctatgtgcctgtcaacagtgcatg
acagaactggaggacgacccctggttcactgaacacttcaatcagtccatccaccctctg
atgaccagggagaacagcgtcctctctgatgaaacctttaaatggtggcagtggttgcag
tcagagaggcagccggccaacttcactgaagtggtggaggagctgttccaagtcatccct
gatgaggtgcttttcatggacgccagccctgagcgctgcaggacctgttccgtcgtgggg
aactctggaaacctaaaggggtctcagtatggcagaatcattgactccagtgatttcatc
ataagaatgaatcaagctcccactgctggttttgaggaggatgtgggtgccagaacaact
cttcatgtcatgtatccagaaagtgccatagacctggacaacaccaccagtctggtgctc
atccctttcaagactctggaccttcagtggctcattagtgccctgaccacaggcaacatt
aaacacacatatataccagttatatccaggataaaggcaaataaagataaggtgttgatt
tacagtccaacattttttaagtacgtctacgagtcttggcttgaaggtcacgggcgatat
ccttcgaccggcttcctcagcttgctgctcgctgttcacatatgtgatgaggtcagagtg
tttggattcggtgcagaccagtatggaaactggcaccactactgggaggagaaccatttg
gctggagctttccgacacacgggtgtccatgatggagattatgagtataatgtcacactg
ctgctggcagacaagcacaaaatccgaatgtttaaaggcagatga
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