Scomber scombrus (Atlantic mackerel): 133997231
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Entry
133997231 CDS
T10651
Symbol
ncoa1
Name
(RefSeq) nuclear receptor coactivator 1 isoform X1
KO
K09101
nuclear receptor coactivator 1 [EC:
2.3.1.48
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
133997231 (ncoa1)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
133997231 (ncoa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NCOA
Nuc_rec_co-act
SRC-1
PAS
PAS_9
PAS_3
PAS_4
Menin
Motif
Other DBs
NCBI-GeneID:
133997231
NCBI-ProteinID:
XP_062292788
LinkDB
All DBs
Position
17:complement(1821812..1985963)
Genome browser
AA seq
1518 aa
AA seq
DB search
MSAVGESPLDPATPESRKRKGSPCDTSGQSLEKRRRELECRYIEELAELLSSNMGDIASL
NVKPDKCHILKSTVDQIQQIKRREQEKAALLSPDDEVQKSDISSSSQGLVEKEALGPMLL
EALDGFFFVVNREGRIVFVSENVTSYLGYAQEELMTSSVYSILHVGDHNEFVRNLLPRSL
VNGVPWPQEASRRNSHSFNCRMLKRPPDEVDSENIEARQQYEIMQCFTVSQPRALQEEGE
DLQSCLICIACRMPRAQPVSTESFITKQDPTGKIISIETSALRATGRPGWEDLVRKCIYA
FFQPQGKEPSHAKKLLHEVMTHGTAISPLYHFTLSDGTPLSAQTRCKFCCPPNPDVQPFI
MGIHTIDREHNTASSQENTNPSLPPSLGSLAQTPPSRSPARPPGSNSTQSSGLAASGLHP
NNNSNNVVVVSSHGHNNPAAAAAATAGYLTPNRTCPRQVNSPSPLSSPLTATPTSFMSPR
MPRVSPGLGGSPRVPGNPFSPSTPGLHSPAGTLSGGGSLNRQQSGGDGSSGASSGAAGGS
FSLSSPAPQRQASTPAGASTRPPDGGEGGGEDSVKAPLPSASQLGNPRINQLLESNGTGA
ESNNSNNNNSIHCTSSPHPNAPAPLSSSSSSSSSSSSVGPQCPASHSTLTERHKILHRLL
QDSSPNDASSTTEDGMNRSEVEIKKEPPASPVVTAALHKPGSREPQDHQLLRFLLDTDEK
DLGDLPPPSALSLQTVRVKVEKRVSGDGVVCAGVTVAAGGGGGGGGGGGGACIPAGVSST
SACISPKSSPVGENRRDSRKDNRDSTMSGGPMDMDPLTQLLPGLRGPSGSKQGSEDSTTP
GGGPPQLQSPAPHSSTQLQSPQSLPQLQSPSPQLHSPSPQLKLQSPPTQLQTGEASTPRN
VNVKREPPGTPNRGLSDGGPPSGCSLQSQTSFDFCSPPTPSQTQAQGQGEAEVINPFSSS
TGLTKLDVSDSQFQPLALSDTLSLDGLGNSLQAPLASPQEQCVPCTLDEVLGPPTTPEGR
NDEKALLEQLVSFLSGTDESELAELDKALGIDKLVQGGCFDPLPQTFPTQQPTASSAAME
PKPPSYPSQFTPAPPAPFPPELAAAVGPQGLGFGAPRAAFPGGTAAGLGGLRPGVTRPQA
IGTQLRLQPNQLRLQLQQRLQGQQQLQNRLAVVNPFPAGAQHVNIGIRQVQQPQMPSQQP
PLNAQMLAQRQRELYSIQHRQRQLFQQKVMLMRQNIAGTPTGAVGPVGTARVPKGPPAAP
QQQQQQFNFPAGYNPMTGNPPTSPSHFSPISGGPLDKTLAGRVPLNNPTLIGGVQGQFSS
TVNSSLQQNLFQQFGGSALVQQDPPFPPEMSPTSPLLSPQNSTSQSPLLQQAPPPGYQSP
DMKSWQQTGLSSSSLFSPSGQSARQPFGQQGVYNNMSITVSMAGGSGGVGSLPPMGQPVV
GMSNSNLSNVGSVCSDQQVQQVQVFADVQCTVNLVGSDSYLNQSSIGAAGASQKGPGPPG
SQNNQAQQKSLLQQLLTE
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtaggggaaagcccgctggaccctgccacgccagagtcacgcaagaggaag
ggctcaccatgcgacacgtcagggcaaagtttggagaagcggagacgggagctggagtgt
cgctacatcgaggagctggccgagctgctgtcgtccaacatgggcgacatcgccagtctc
aacgtcaagccagacaagtgccacatcctgaagagcaccgtggaccaaatccagcagatc
aaacggcgtgaacaggagaaagcagctcttttgtctccggatgacgaggtgcagaagagc
gacatctcctccagtagccagggactggtggagaaggaggcgctggggcccatgctgcta
gaggccctcgacgggtttttcttcgtcgtgaaccgggagggccgcatcgtcttcgtgtcg
gagaacgtgacgagttaccttggttacgctcaggaggagctgatgacgtccagcgtctac
agcatcctgcacgttggagatcacaacgagttcgtacgcaatctgctgcccagaagcctc
gtgaacggcgtgccgtggccgcaggaagcgagccggaggaacagtcactcctttaactgt
cgcatgctgaagaggccgccggacgaggtcgactcagagaacatcgaagctcggcagcag
tacgagatcatgcaatgcttcaccgtgtcacagccgagggccctgcaggaggaaggagaa
gacctgcagagctgtctgatctgtattgcatgtcggatgcctcgagctcaacctgtcagc
actgagtccttcatcaccaagcaggatcccacagggaagatcatctccatagaaacgagt
gctttgcgggcgacgggccggcctggctgggaggacctggtcaggaagtgcatctacgct
ttctttcagccgcagggcaaagagccttcccacgccaagaagctgctgcatgaggtgatg
acccacggcaccgctatcagcccgctgtatcatttcacgttaagcgacggcactccgctc
agcgctcagacccgctgcaagttctgctgcccccccaaccctgatgtacagcccttcatt
atgggcattcacactattgacagggaacacaacactgctagctctcaggaaaacactaac
cccagccttccaccttccctgggcagcctcgcccaaacccccccctcccgctcccctgcc
cgtcctcccggcagcaactccacccaaagctctggcctcgccgcgtcgggcctccaccca
aacaacaacagcaacaacgtcgtcgtcgtctcctcccacggacacaacaaccccgctgcc
gccgccgccgccaccgccggctacctgacgcccaaccggacgtgcccccgccaggtcaac
agcccctctcctctgagcagcccactcacagcaacccctacctcttttatgtcgcccagg
atgccgcgggtcagtcctgggttagggggaagccctcgcgtaccggggaaccccttctct
ccctccacaccgggcctccattctccagccgggacgctgagcggcggaggaagcctcaac
cggcagcagtctggcggcgacggcagtagcggcgccagcagtggggcagcgggagggtct
ttctccctttcctctcctgcccctcagagacaagccagtacgcccgccggcgcctccacg
cggccgccagacggaggcgaaggagggggagaggactctgtaaaagccccccttccttct
gcctcacagctgggtaaccccagaatcaatcagctcctggaaagcaatgggacaggagct
gaatctaacaacagcaacaacaacaacagcatccattgcacctcatcacctcatcccaac
gcccccgctcccctctcctcctcttcttcctcttcctcttcctcttcctccgtcggccct
cagtgccccgcctcccacagcaccctgacagaacgacacaagatcctgcaccggctgctc
caggacagcagccccaacgacgcctcctccaccaccgaggacgggatgaacagaagcgaa
gtggagataaagaaggagccgcctgccagtcccgtggtgacggcagcgcttcacaagccc
ggatccagagagccgcaggatcaccagctactccgatttctgcttgatacagacgagaag
gatttgggagacctgccgcctccgtcagctctcagcctgcagacggttagagtgaaggtg
gagaagagagtgagcggggacggagtggtctgtgcaggagtgactgttgcagcaggagga
ggaggaggaggaggaggaggaggaggaggagcatgcatacctgcaggagtgtccagcact
tcggcttgcatcagccccaagtcgagtcctgtcggagagaaccggagagacagccgcaag
gacaaccgagactcaacgatgtccggtggtcctatggacatggatcctcttacccagctg
ctgcctggcctgagaggcccgagcgggtccaaacagggcagcgaggattcaacgacccct
ggaggaggccccccccagctccagtctccggccccccactcctcaactcagctccagtcc
ccccagtcccttccccagttacagtccccgtccccccagcttcactccccttccccccag
ctcaaactgcagtcgccccccactcagctccagaccggcgaggccagcactccccgcaat
gtaaatgtgaagagagagccgcccggcactcctaacagagggctcagtgatggcggccct
ccttccggttgcagcctccagagtcagacgtcttttgacttctgcagtcctcccactcca
agccaaacgcaggcgcagggacagggagaggcagaagttatcaacccattcagttcaagc
actggcctcactaagctggacgtgtcagactcccagttccagcctctcgctctctctgac
actttgtctctcgatggtcttggaaactctttacaagctccgttggcatcaccacaagag
cagtgtgtgccgtgtacgctggatgaagtgctcggccctccgacgacacccgaaggccga
aatgatgagaaagctctgttagagcagctggtgtcgttcctcagcgggaccgatgagagc
gagctggccgagctggacaaagctctgggtatcgataaactggttcagggtggctgtttc
gaccctttgccccagaccttcccgacccagcaacccactgcctcctcagcagccatggag
cccaaaccgccctcctacccttctcaattcacgccagctccaccagctccgtttcctcca
gagctggcggccgcggtgggtccgcagggtctggggttcggagccccgagagcggctttc
cccggggggacggcggcgggtttaggcggactgaggcccggcgtgacgaggccgcaggcg
atcgggactcagctcaggctgcagccaaaccaactgcgcctgcagctgcagcagagactg
cagggacaacagcagctccagaacaggctggcggtggtgaatccgttcccagcaggagct
cagcatgtgaacattgggattcgtcaggtccagcagcctcagatgccgtcacaacagcct
cctctgaacgctcagatgctggcgcagcgtcagagggaactctacagcatccagcaccgc
cagcgccaactgttccagcagaaggtcatgctgatgagacagaacatcgccggcacgccg
accggagctgtggggcccgtcggcactgccagggtcccaaaaggcccccccgctgccccc
cagcagcagcagcaacagttcaacttcccggcagggtacaacccgatgacgggaaaccct
cctacctcaccaagtcacttcagtcccatttccgggggtccgctggacaaaacgctggcg
ggcagagttcccctgaataacccaacgctgattggaggcgtgcagggccagttcagcagc
accgtcaactcctcgttacagcagaacctgtttcagcagtttggagggtctgctctggta
cagcaggatccacctttccctcctgagatgagccccaccagccctttgttgtcgcctcag
aactccacctcccagagtcctttgctccagcaggccccgcctcccggctaccagtcacct
gacatgaagagctggcagcagacgggcctgagcagcagcagcctgttcagtccatcgggg
cagagcgcacggcagccgtttggccagcagggggtttacaacaacatgagcatcaccgtc
tccatggccggaggctcgggaggagttggctcgttacctcccatggggcagcccgtcgtc
ggcatgagcaacagtaacctcagcaacgtcggttcggtgtgtagcgaccagcaggtgcag
caggttcaggtgtttgcggacgtccagtgcacagtgaaccttgttggcagtgactcctac
ctgaaccagagctccatcggagccgccggcgcctcccagaagggccccggaccgccgggc
tcccagaacaaccaggcccagcagaagagcctcctccagcagctgctcaccgagtga
DBGET
integrated database retrieval system
