Scomber scombrus (Atlantic mackerel): 133997670
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Entry
133997670 CDS
T10651
Symbol
tshr
Name
(RefSeq) thyrotropin receptor
KO
K04249
thyrotropin receptor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133997670 (tshr)
04081 Hormone signaling
133997670 (tshr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133997670 (tshr)
G protein-coupled receptors [BR:
ssco04030
]
Rhodopsin family
Peptide
Thyrotropin
133997670 (tshr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
LRR_4
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
133997670
NCBI-ProteinID:
XP_062293334
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Position
17:complement(8432694..8452054)
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AA seq
778 aa
AA seq
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MQVIACALFTLVALPVSAASEEDSCPAVCECSEWKTHTISCFDIDILPRFPASTETLWLF
ETRLSSVPADAFANMVNISRIYISVDVTLQRLERHSFYSLRKITHIEIRNAKSLTYIDPE
AFKNLPNLKYLGIFNTGLTFFPDLSNIHSNDMNFILEIVDHPYMTEIPANSFCGITSEVL
TVMLYGNGFRVIQHHAFNGTKLDQVDLHRNKYLTKMDERAFVGTISGPMLLDVSQTGITS
LPTAGMDSVRELKARNAFALKKLPPIKTFKHLTNANLTYPSHCCGFKNLKKKRGFLEYII
CNLTAFYDQHHKRSVGPLRIPSLQEESEVETVPDEELNDGGQRESQQDWRRGDFHGSLHY
HAYFGGQPDEDVGFGETLKNPQEDTSQDFDSRYDYVVCEEGEEVACAPVPDEFNPCEDIM
GFGFLRVSVWFVSLLAVLGNVVVLLVLLTSHYKLSVSRFLMCHLAFADLCMGIYLLLIAS
VDLHTRAEYFNHAIDWQTGPGCGLAGFFTVFASELSVYTLTVITLERWYAITFAMRLDRK
LHLHHAAVVMLGGWIFCLILALLPLVGVSSYQKVSICLPMDTQSKMAQVYVISVLVLNIL
AFLVICACYVKIYCAVHNPHYHSGSKDTNIAKRMAVLIFTDFLCMAPISFYAMSAVLDRP
LITVSNSKILLVLFYPLNSCANPFLYAIFTKAFRGDVFILLSKVGLCQQRAQLFRGQTVS
SKCSSGTSQIRKDKDKIRKGGGAGQEEVPIHLKKCSGHTYQQPVSQQTSPEENQNLDT
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatagcatgcgccttgtttacgctggttgctctgcctgtcagcgctgcgtcg
gaagaggactcctgccctgctgtctgcgagtgctcagagtggaagactcacaccatctcc
tgctttgacattgatattctccccaggtttcctgcgagcacggagacactatggcttttt
gagacccgtctttcatccgtgccagcagatgcttttgccaacatggtcaacatctctagg
atatatatatcagtggatgtgacgctgcagaggctggagaggcactcattctacagcctg
aggaaaatcacccacatagagatacgaaatgcaaagagtctgacctacattgacccagaa
gcctttaagaatctcccaaacctcaaatacctggggattttcaatactggccttactttc
ttccctgacttgagcaacatccactctaatgacatgaacttcatactggaaatcgttgat
catccctacatgaccgagatcccggccaactcattctgtggcattaccagtgaagtgctt
acagtgatgctgtatggaaacggcttcagagtaatccagcatcacgcctttaatgggacc
aaactagatcaagtcgaccttcacaggaacaagtatttgaccaagatggatgaaagggct
tttgtgggaaccatcagcggccccatgcttctagacgtatcccagacggggatcacctcc
ctgcctacagcaggtatggattctgtccgtgagctgaaggcgcgtaatgcctttgccctc
aagaaactgccacccatcaaaaccttcaagcacctcactaatgccaaccttacctacccc
agtcactgctgcggtttcaaaaacctcaagaagaaacgaggctttttggagtacatcatc
tgtaacctgactgctttctacgaccagcatcacaagcgctctgtggggcctcttcgcata
ccttccctccaagaggagagcgaggtggagacagtcccagacgaggagctgaacgacgga
ggccaaagagaatcccaacaagactggaggagaggtgacttccatggtagcctgcactac
cacgcctactttgggggccagccagatgaggatgtgggtttcggcgagaccctcaagaac
ccccaggaagacacaagccaagactttgacagtcgttatgactatgtggtgtgcgaggag
ggagaggaggtggcgtgtgcaccagtgcctgatgagttcaatccttgtgaggacataatg
ggttttggattcctgcgagtgtctgtgtggtttgtgagtctgctggctgttctgggaaat
gtggtggtactcctggtgctgcttaccagccactacaagctctctgtctcccgcttcctc
atgtgccacctggcatttgcagatctttgcatggggatttatctgctgcttattgcttct
gtagacctccacactagagccgagtactttaaccatgccatagactggcagacgggcccc
ggctgtggacttgcagggttttttacagtctttgccagcgagctgtctgtgtacaccttg
acagtgatcactctcgagaggtggtacgcaatcactttcgctatgaggctggatcgtaaa
ctgcacctgcaccatgcagcagtggtgatgctaggtggctggatcttctgcctcatcctg
gcgctgctcccactggttggggtaagcagttaccaaaaggtcagcatctgtctcccaatg
gacacccagtccaaaatggcacaggtctatgtcatctcagtgctggtcctcaacatcctg
gcctttctggttatctgtgcctgctacgtcaagatctactgtgcagtgcacaaccctcac
taccattctggatccaaggataccaacattgccaagcgcatggctgtcctgatctttact
gacttcttgtgcatggcaccaatctccttctacgccatgtcagccgtgctggatcggccg
ctcatcaccgtctccaactccaaaattttattggtgctcttctacccactcaattcctgt
gctaacccgttcctttacgccatcttcaccaaggctttcagaggggacgtattcatcctc
ctcagtaaggtgggcctatgtcagcagcgagcacaactgttcagaggccagacagtttcg
tcaaaatgcagcagtgggacatcccagatccgtaaagacaaggataagattagaaaagga
ggaggtgcaggccaggaggaggtgcccatccacctgaagaaatgctctggacatacctac
caacagccagtcagccagcagacaagccctgaagagaaccagaatctggacacgtga
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