KEGG   Scomber scombrus (Atlantic mackerel): 133999135
Entry
133999135         CDS       T10651                                 
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
  KO
K23611  guanine nucleotide exchange protein SMCR8
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    133999135 (smcr8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133999135 (smcr8a)
Membrane trafficking [BR:ssco04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    133999135 (smcr8a)
SSDB
Motif
Pfam: Folliculin
Other DBs
NCBI-GeneID: 133999135
NCBI-ProteinID: XP_062294289
LinkDB
Position
18:complement(20558020..20565417)
AA seq 947 aa
MIGSPDLVAFTKEDEYGQTSPDPWALPEEFSVPLYPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKICGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQRMYSAHAVEKANELANVEKS
IYEHRDLLKQISLYNRRPRRDPHAVTCQKCMSECLSECEALLDKYAKLANPFSYNNKGEK
REEGQADGGGGDGEGDEEEDESVKRRPSYTPQLIKAKSAKCFDKRLKTLLELCENTFYSA
TVELLKETERSFRGDLCYLHTRRLDRALCRKQRITNFLFEEDLGDDDEDEGRTLRPFCAV
NHAVDNYSLLNPPPIVLGPDHLELDSLEPPDPLDPASETSHTQESELGLRESHLESSPSD
QTLETQESSEETKGSFSSDKSGLGQSERQQNLAGMKSEAPDPDPDSDLTPDPDHNTDMER
ESSSEETETTAGDDEGDNKEDQTPTSLLEVVSGLEASREDVCEGEAEEVSDLLVQIDTAC
CMAQEGFLYEASAPEAVPRLSQNSHPQPLSQTLVVNQEPQAQIPLQDDYTVGSPCSESPA
AGLELPVGLLGDAVSRTSVEDGWDCTMSASTGSDRAASPLGYGGTVTLRQRKKAGQGALR
FVRQYPFAMQALWCLLSGRTLVVLGADEGRVRRLVAALALFVPSPGKCGERIQAWLSCPF
TLTDLQRWKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIAD
HRTYIRRGSTYFLHVQSTLCRLAAKAFLFTFTHHLHLPVSSTEGPEGLEGRRCCFLQEQL
GLGEEDSHILLYLSQLITHQYLQPANRSSATAPCFSFNYSTSVLYKI
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgataggctcacctgacctggtggctttcactaaagaggacgagtatgggcagaccagt
cccgacccctgggctctccccgaggagttctctgttcccctctatccgctggctgactcc
aacccttgggccaaaacctcctatgccaagttcaccaaagacttcatcctcatctctgag
ttctctgaacaggtgggccctcagcctctcctcaccatccctgatgaccctaaaatctgc
ggcaccttcgatctcaactacttctccctgcgcatcatgtcagtggattaccaggcctcc
ttcgtggggcatccacccggcagcggctacccaaggctcagctttgtggaggactccagg
gtggtgctgggcgactcaaaggagggggcgttcgcctacgtccaccaccttacgctttac
gacctggaagcgaggggctttgtgcgaccgttctgcatggcgtatgtttcagcagatgag
aggaagatcatgctgcagttccaagagctgtccctccgcttctcgcaggcctctgagtgt
ctgaaggctggaaacagaagagccttcgccaaggaactgcagaggaagctccgagacctg
gagtacactcactcggtgctgcagagggaggagggtctgcagagagaggcgggccctcag
cgcatgtactccgctcacgccgtggagaaggccaacgagcttgccaacgtggaaaagagc
atctatgaacacagagacctgttgaaacagatcagcttgtacaatcgccgcccgcgccgg
gaccctcacgccgtcacctgccagaagtgtatgtccgagtgcttgagcgagtgcgaggcg
ctgctggacaaatacgccaagcttgccaaccccttcagttacaacaacaaaggggagaag
agggaggagggtcaggctgatggtggaggaggtgatggagaaggggacgaggaagaggac
gagagcgttaaacgtaggccgtcctacacgccacagctgatcaaagctaagtccgccaag
tgttttgacaagcgcctcaagacactcctagagctgtgtgaaaacactttctacagcgcc
accgtggagctcctgaaggagacggagaggagtttccgaggcgacttgtgctacctgcac
acacgccgcctggacagggcgctatgcaggaaacagagaattaccaacttcctgtttgag
gaagacctcggtgatgacgatgaggacgaagggagaacactcagaccattctgtgctgtg
aaccatgccgtagacaactactcactcttaaaccctcctcctatagtgctggggccagat
catttagagctcgactctttggagccaccggacccgttagacccagcctccgagaccagc
catactcaggagagtgagcttgggcttagggagagccacctggagtcttccccttcagac
cagactctggagacccaggagagttcggaggagaccaaaggcagctttagcagtgacaag
agcgggctgggacaatccgagaggcaacagaatctggctggtatgaagtcagaagctcct
gatcctgatcctgactctgatttgacaccggacccagaccataacactgacatggagagg
gagagcagcagtgaggagacggagaccactgcaggagatgatgagggtgacaacaaagaa
gaccagacgcccacctctttactggaagtggtctctgggctggaggccagcagggaggat
gtgtgtgagggagaagctgaggaggtgtctgatctgctggttcaaatagacacggcatgc
tgtatggcccaagagggtttcctttatgaggcttctgcaccagaagcagtgcctcgcctg
agccaaaactcccacccacagcccctctctcaaacgctggtggtcaaccaggagccccag
gcccagattccactccaggacgactatactgtgggttccccgtgctcagaaagccccgca
gctgggctggagctgcctgtggggctcctgggagatgctgtttcccgcacctcagtggag
gatgggtgggactgtaccatgagtgcttctacagggtctgaccgggctgcctcaccgctc
ggctacggagggacagtgaccctgcgtcagaggaagaaggctggacaaggagccttgagg
tttgtgcgacagtacccgtttgccatgcaagctctgtggtgtctgctgagtggaaggacc
ctggtggtgctcggggcagatgaggggagggtccgccgcctggttgctgctctggccctc
ttcgtgcccagtcctgggaagtgtggtgagaggattcaagcttggctgtcctgcccattc
acccttactgacctgcagaggtggaaactcattggattgcaacgagtggcatcccctgtg
ggctccagcatgctttattcgctgtcccgctacagtcgctacatctccatcctggatgca
gaccagaagaccttgcgctgtccaccatatcgcggccaacttcttgccaacatagccgac
caccgcacctacatccgccgtggttccacctacttccttcacgtgcagagcactctctgt
cgcctggcagccaaggccttcctgtttaccttcacccaccacctgcacctgccggtgagc
tctacggagggtccagagggcctggagggccgacgctgctgcttcctgcaggagcagctg
gggctgggggaggaggacagccacatactgctctacctcagccagctcatcactcatcag
tacctacagcctgccaacaggagcagtgcaacagcaccttgttttagttttaactacagc
accagcgttttatacaaaatctaa

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