Scomber scombrus (Atlantic mackerel): 133999135
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Entry
133999135 CDS
T10651
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133999135 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133999135 (smcr8a)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133999135 (smcr8a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
133999135
NCBI-ProteinID:
XP_062294289
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All DBs
Position
18:complement(20558020..20565417)
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AA seq
947 aa
AA seq
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MIGSPDLVAFTKEDEYGQTSPDPWALPEEFSVPLYPLADSNPWAKTSYAKFTKDFILISE
FSEQVGPQPLLTIPDDPKICGTFDLNYFSLRIMSVDYQASFVGHPPGSGYPRLSFVEDSR
VVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYVSADERKIMLQFQELSLRFSQASEC
LKAGNRRAFAKELQRKLRDLEYTHSVLQREEGLQREAGPQRMYSAHAVEKANELANVEKS
IYEHRDLLKQISLYNRRPRRDPHAVTCQKCMSECLSECEALLDKYAKLANPFSYNNKGEK
REEGQADGGGGDGEGDEEEDESVKRRPSYTPQLIKAKSAKCFDKRLKTLLELCENTFYSA
TVELLKETERSFRGDLCYLHTRRLDRALCRKQRITNFLFEEDLGDDDEDEGRTLRPFCAV
NHAVDNYSLLNPPPIVLGPDHLELDSLEPPDPLDPASETSHTQESELGLRESHLESSPSD
QTLETQESSEETKGSFSSDKSGLGQSERQQNLAGMKSEAPDPDPDSDLTPDPDHNTDMER
ESSSEETETTAGDDEGDNKEDQTPTSLLEVVSGLEASREDVCEGEAEEVSDLLVQIDTAC
CMAQEGFLYEASAPEAVPRLSQNSHPQPLSQTLVVNQEPQAQIPLQDDYTVGSPCSESPA
AGLELPVGLLGDAVSRTSVEDGWDCTMSASTGSDRAASPLGYGGTVTLRQRKKAGQGALR
FVRQYPFAMQALWCLLSGRTLVVLGADEGRVRRLVAALALFVPSPGKCGERIQAWLSCPF
TLTDLQRWKLIGLQRVASPVGSSMLYSLSRYSRYISILDADQKTLRCPPYRGQLLANIAD
HRTYIRRGSTYFLHVQSTLCRLAAKAFLFTFTHHLHLPVSSTEGPEGLEGRRCCFLQEQL
GLGEEDSHILLYLSQLITHQYLQPANRSSATAPCFSFNYSTSVLYKI
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgataggctcacctgacctggtggctttcactaaagaggacgagtatgggcagaccagt
cccgacccctgggctctccccgaggagttctctgttcccctctatccgctggctgactcc
aacccttgggccaaaacctcctatgccaagttcaccaaagacttcatcctcatctctgag
ttctctgaacaggtgggccctcagcctctcctcaccatccctgatgaccctaaaatctgc
ggcaccttcgatctcaactacttctccctgcgcatcatgtcagtggattaccaggcctcc
ttcgtggggcatccacccggcagcggctacccaaggctcagctttgtggaggactccagg
gtggtgctgggcgactcaaaggagggggcgttcgcctacgtccaccaccttacgctttac
gacctggaagcgaggggctttgtgcgaccgttctgcatggcgtatgtttcagcagatgag
aggaagatcatgctgcagttccaagagctgtccctccgcttctcgcaggcctctgagtgt
ctgaaggctggaaacagaagagccttcgccaaggaactgcagaggaagctccgagacctg
gagtacactcactcggtgctgcagagggaggagggtctgcagagagaggcgggccctcag
cgcatgtactccgctcacgccgtggagaaggccaacgagcttgccaacgtggaaaagagc
atctatgaacacagagacctgttgaaacagatcagcttgtacaatcgccgcccgcgccgg
gaccctcacgccgtcacctgccagaagtgtatgtccgagtgcttgagcgagtgcgaggcg
ctgctggacaaatacgccaagcttgccaaccccttcagttacaacaacaaaggggagaag
agggaggagggtcaggctgatggtggaggaggtgatggagaaggggacgaggaagaggac
gagagcgttaaacgtaggccgtcctacacgccacagctgatcaaagctaagtccgccaag
tgttttgacaagcgcctcaagacactcctagagctgtgtgaaaacactttctacagcgcc
accgtggagctcctgaaggagacggagaggagtttccgaggcgacttgtgctacctgcac
acacgccgcctggacagggcgctatgcaggaaacagagaattaccaacttcctgtttgag
gaagacctcggtgatgacgatgaggacgaagggagaacactcagaccattctgtgctgtg
aaccatgccgtagacaactactcactcttaaaccctcctcctatagtgctggggccagat
catttagagctcgactctttggagccaccggacccgttagacccagcctccgagaccagc
catactcaggagagtgagcttgggcttagggagagccacctggagtcttccccttcagac
cagactctggagacccaggagagttcggaggagaccaaaggcagctttagcagtgacaag
agcgggctgggacaatccgagaggcaacagaatctggctggtatgaagtcagaagctcct
gatcctgatcctgactctgatttgacaccggacccagaccataacactgacatggagagg
gagagcagcagtgaggagacggagaccactgcaggagatgatgagggtgacaacaaagaa
gaccagacgcccacctctttactggaagtggtctctgggctggaggccagcagggaggat
gtgtgtgagggagaagctgaggaggtgtctgatctgctggttcaaatagacacggcatgc
tgtatggcccaagagggtttcctttatgaggcttctgcaccagaagcagtgcctcgcctg
agccaaaactcccacccacagcccctctctcaaacgctggtggtcaaccaggagccccag
gcccagattccactccaggacgactatactgtgggttccccgtgctcagaaagccccgca
gctgggctggagctgcctgtggggctcctgggagatgctgtttcccgcacctcagtggag
gatgggtgggactgtaccatgagtgcttctacagggtctgaccgggctgcctcaccgctc
ggctacggagggacagtgaccctgcgtcagaggaagaaggctggacaaggagccttgagg
tttgtgcgacagtacccgtttgccatgcaagctctgtggtgtctgctgagtggaaggacc
ctggtggtgctcggggcagatgaggggagggtccgccgcctggttgctgctctggccctc
ttcgtgcccagtcctgggaagtgtggtgagaggattcaagcttggctgtcctgcccattc
acccttactgacctgcagaggtggaaactcattggattgcaacgagtggcatcccctgtg
ggctccagcatgctttattcgctgtcccgctacagtcgctacatctccatcctggatgca
gaccagaagaccttgcgctgtccaccatatcgcggccaacttcttgccaacatagccgac
caccgcacctacatccgccgtggttccacctacttccttcacgtgcagagcactctctgt
cgcctggcagccaaggccttcctgtttaccttcacccaccacctgcacctgccggtgagc
tctacggagggtccagagggcctggagggccgacgctgctgcttcctgcaggagcagctg
gggctgggggaggaggacagccacatactgctctacctcagccagctcatcactcatcag
tacctacagcctgccaacaggagcagtgcaacagcaccttgttttagttttaactacagc
accagcgttttatacaaaatctaa
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