Scomber scombrus (Atlantic mackerel): 133999545
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Entry
133999545 CDS
T10651
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04020
Calcium signaling pathway
ssco04510
Focal adhesion
ssco04540
Gap junction
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133999545 (pdgfab)
04020 Calcium signaling pathway
133999545 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133999545 (pdgfab)
04540 Gap junction
133999545 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133999545 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
133999545 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
133999545 (pdgfab)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Growth factors (RTK binding)
133999545 (pdgfab)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Growth factors/receptors
133999545 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
133999545
NCBI-ProteinID:
XP_062294745
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All DBs
Position
18:14425616..14445695
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AA seq
208 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLEIDSVGTGNDVI
EEPKHHKHHNHHKNYSRHPGYYNELKSSQLHSRRKRSLVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYVRRRPKLKEVFV
RLEDHLECVCTSQHHVVEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgttgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggagattgactccgtaggtacgggaaacgatgttatt
gaggagcccaagcatcacaaacaccacaaccaccataagaactattcccgtcaccctggt
tactacaacgaattgaagagctcccagctccacagccgacgcaagaggagtctcgtggaa
gaggcggtcccagcagtgtgtaagacgcggacggtgatctacgagatccccaggagccag
gtggatcccacatctgctaacttcctgatatggccgccctgtgtggaggtgaagcgctgc
acgggctgctgcaacaccagtaacatgcgctgtcatccttcccgcaagcaccaccgcacc
gtgaaggtggccaaggtggagtacgtgagaaggagacccaagctgaaagaggtctttgtg
cggttagaagaccacctggagtgtgtgtgcacgtcacagcatcatgtggtggagcactca
gatgcagaaacagtggacgtgaggtga
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