Scomber scombrus (Atlantic mackerel): 133999963
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Entry
133999963 CDS
T10651
Name
(RefSeq) uncharacterized protein LOC133999963
KO
K06856
immunoglobulin heavy chain
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020
Calcium signaling pathway
ssco04145
Phagosome
ssco04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
133999963
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133999963
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133999963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133999963
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Opsonins
133999963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Motif
Other DBs
NCBI-GeneID:
133999963
NCBI-ProteinID:
XP_062295292
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Position
18:complement(17278543..17282283)
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AA seq
359 aa
AA seq
DB search
MGRMYSDASGTDYSSSVQGRIEITRDNSNSMVHLRLSNLKPEDSAVTSSVLTQTLSAVKK
PGESHKLTCTASGFTFSSYSMNWIRQAPGKGLEWIAYIYSDGSSYIYYSQSVEGRFTISR
DNSRQQLYLQMNSLKTEDSAVYYCARHSHTVSPKPQAAAQGQSLTSSEPVVNRAGQSVTL
SCKVEGLSLAWLHWIRQKSGKVLEWIGRIDSGTGTIFSQSLQGQFSITKDTSRNVVYFQM
MDYRTGLLLLTICWTGVDGQTLTQSEPAVKKPGESHKLTCTASDLDISSSWMAWIRQAPG
KGLEWISIIEDDSDRIYYSQSVQGRFTISRDNSRQQLYLQMNSLKTEDSAVYYCARDSQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtatgtatagcgatgcaagtggaacggattattccagcagtgtgcaaggacgg
atagaaatcaccagagataatagtaacagcatggttcatctgagactgtccaacttaaag
ccagaggactctgctgtaacaagttcagtattgactcagactctttcagcagttaaaaag
cctggagaatcccacaaactgacctgtacagcctctggattcacattcagcagctatagt
atgaattggatcagacaggctcctggaaaaggactggagtggattgcttacatctacagt
gatggtagcagctacatctactactctcagtcagttgaaggccggttcaccatctccaga
gacaacagcagacagcagctgtatctgcagatgaacagtctgaagactgaagattctgct
gtttattattgtgctcgacactcacacactgtgtctccaaaacctcaggctgctgctcag
ggccagtccctcacctcctcagagccggtggtcaacagagctggacaatcagtcactctg
tcctgtaaagttgaaggactttctcttgcttggctgcactggattcgtcagaaatcaggg
aaagtactggagtggattggacgcattgatagtgggactggcacaatattttcccaaagt
cttcaaggccagttttccatcactaaagacacttcccgaaatgttgtgtactttcagatg
atggactataggacaggactgctgcttctaactatctgctggacaggtgttgatggtcag
actctgacacaatctgaaccagcagttaaaaagcctggagaatcccacaaactgacctgt
acagcctctgatcttgacataagtagctcttggatggcctggatcagacaggctcctgga
aaaggactggagtggatttcaattatcgaagatgacagtgacaggatctactactctcag
tcagttcaaggccggttcaccatctccagagacaacagcagacagcagctgtatctgcag
atgaacagtctgaagactgaagattctgctgtttattattgtgctcgagactcacagtga
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