Scomber scombrus (Atlantic mackerel): 134000628
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Entry
134000628 CDS
T10651
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
134000628 (bcl11ba)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
134000628 (bcl11ba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
134000628
NCBI-ProteinID:
XP_062296018
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All DBs
Position
19:24773538..24820191
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AA seq
867 aa
AA seq
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MSRRKQGNPQHLSQREITPEVEHPDGGLLSDSLPPHPLTLPPHPLILPPHPLDPSLAHAL
PPGLHADHDLLTCGQCQMTFPLGDILLFIEHKKKQCQTPLLANGCYDKINDHRGGGGGGG
SPTLQSLHHHAQRLELRKVLEPVEIGIQVTPEEEEEVEGVRGGGERGARTPIKGICPKQE
NTLAGAARFFPVTACNFLRQGGRDEPSSYICTTCKQPFPSAWFLLQHAQNTHGIRIYLES
NPSSTALTPRITMPPPMGNDSIPQSPLTNFLGDNNPFHLLRMAGPLLREPPPSFVESRLP
NTPPFVSPPPRHHLDPHRLERLSAEEMGLISQHPSAFERVMRLTPMAMESQSMDFSRRLR
ELAGNNNSTTPPLSPSRANPMHRLLNPNPFQPGPKSPFLSTPPLPPMPPNSTTPPQTQNK
VKSCEFCGKTFKFQSNLVVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGSLT
GRSDDGLSTTSSPEPGTSDVTGEGMKNRDGDFQGEGNEEEEEEEEEEELENESRPESNFS
IESEFFRNRENGSKPPSEEKSSLALEKMVESGGINSIQQFNNLIVDNRKRMPFSKRGMDV
QRDTGDEDSVVGEMDHHHHQQEERTTINGRNCGSSDSFSGLFPRKPTPITSPSLSNSSNK
RIKIEKDLDMPPAPHIPSENVYSQWLVGYAASRHFIKDPFLGFTDSRQSPFATSSEHSSE
NGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHLGGGAGRPSSKDSRRCDTCEYCGKVFKN
CSNLTVHRRSHTGERPYKCELCNYACAQSSKLTRHMKTHGQHGKEVYRCDICQMPFSVYS
TLEKHMKKWHGEHLMTNEVKIEQAERT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccacagcacctgtcccagagagaaataacaccagag
gttgagcatccagatggcggcctgctctctgactccctacccccccatccgctcacttta
cccccccacccgctcatcctacctccccaccctctggacccaagcctggcccacgccctg
ccgcccggcctccacgccgaccacgacctgctgacatgcggccagtgccagatgaccttc
ccgctgggcgacatcctcctcttcatcgagcacaagaagaagcagtgccagacgccgctg
ctggccaatggctgctacgacaagatcaacgaccaccggggaggaggaggaggaggagga
agtccgactctgcagagccttcatcaccacgcccagcggttggagctgaggaaggtgtta
gagccggtggagatcggcatccaggtgacaccggaggaggaggaggaggtggagggagtg
aggggaggaggcgagaggggagcgaggacgcccatcaaaggaatttgccccaagcaggag
aacacactggcaggagctgctaggttctttcctgttaccgcctgcaacttcttgcgccaa
ggtggcagagatgagccttccagctatatatgtaccacatgtaagcagcccttccccagc
gcctggttcctgctgcagcatgcccagaacacccacggcattcgcatctacctggagtcc
aacccctccagcacagccctcaccccacgcatcactatgcctccacccatgggtaacgac
tccatcccgcagtcccccctcaccaactttctcggggacaataaccccttccacctcctg
aggatggcgggtcccctgcttcgggagcctcctccgagcttcgtggagagccgcctccct
aacacgcctccatttgtcagcccgcctccccgccaccacctggatccccatcgactggaa
cgccttagcgcagaggaaatgggcctcatctcccagcaccccagtgcctttgagcgggtg
atgcgcctaacgcctatggccatggagtcccagtccatggacttctccaggcggttacgt
gagttggcagggaacaacaacagcaccacaccaccgctgtcacccagcagggccaaccct
atgcaccgactactaaaccctaacccgttccagcctgggcccaaatcgccctttctgagc
acccctcccctaccaccgatgcccccgaacagcaccacccctcctcagacacaaaacaag
gtgaagtcctgtgagttctgtgggaagaccttcaagttccagagcaacttggtggtgcat
cgacgcagccatactggagaaaaaccatataagtgccagctttgtgaccatgcctgctcc
caggctagcaagctgaagcgccatatgaaaactcacatgcacaaggctgggtcgctgacg
gggcgttcggatgatggattgtccaccacgagctcgccagagcctggtaccagtgacgtc
acaggggaggggatgaaaaatcgcgatggggacttccagggggaaggtaatgaggaggag
gaagaggaggaagaagaggaagaactcgagaatgagagtcgaccggaatccaacttcagc
attgagtctgagttcttccgaaacagggagaatggttctaaaccgccctcagaggagaag
tcatcactcgcccttgagaagatggtggaaagtggagggatcaactctatacagcagttc
aataacttaatagttgacaatcgtaaaaggatgcccttctctaagaggggcatggatgtc
cagcgggacactggggatgaggactcggtggttggggagatggaccaccaccaccaccag
caggaagagaggacaaccattaatggccggaactgtggctccagtgactctttctcaggc
ctgttcccccgtaagcccacccccatcaccagccccagcttgtccaactcctcaaataaa
aggatcaagattgagaaggacttggacatgcccccagcaccccacattccttctgagaac
gtctactcccagtggttggtgggctatgccgcctcacgccacttcatcaaagaccctttc
ctaggcttcactgactccagacaatcgcccttcgccacctcctctgagcactcatccgag
aatggcagcctgcggttctcaacgcctccaggcgatctgctagatggtggcctatcaggc
cgcagtggcaccgccagcgggggcagcacacctcatctgggtggaggagccggccgaccg
agctcaaaggacagcaggaggtgtgacacctgcgagtactgtggcaaggtgttcaagaac
tgtagcaacctgacggtgcaccggcgtagtcacactggcgagaggccctacaagtgtgag
ctgtgcaactatgcctgcgcccagagctccaagctcacgcgccacatgaagacacatggc
cagcatggtaaggaggtttaccgctgtgacatttgccaaatgcccttcagcgtgtacagc
actctggagaaacatatgaaaaagtggcatggagaacatttgatgaccaatgaggtcaaa
attgaacaagcagagagaacctaa
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