Scomber scombrus (Atlantic mackerel): 134001056
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Entry
134001056 CDS
T10651
Name
(RefSeq) otoferlin-like
KO
K19949
otoferlin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Membrane trafficking [BR:
ssco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134001056
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134001056
NCBI-ProteinID:
XP_062296579
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Position
19:7373085..7387491
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AA seq
1792 aa
AA seq
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MKRSKHRGHKEDRNGDEPAILETENLDRKLMGGPDPDTISLASVTAVTTNVSNKRSKPDI
KMEPSSGRPVDYQVSVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNEYFV
FDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYGQPEHQFYHKWALLTDP
EDITAGCKGYIKCDVAVVAKGDTIKTPHKANESDEDDIEGNLLIPEGVPAERQWARYYLK
IYRAEGLPRMNTSIMANVKKAFIGENKDLVDPYVQVLFAGQKGKTSVQKSCYEPIWNEQI
VFTEMFPPLCKRMKIQIRDSDKVNDVAIGTHFLDLRKISNDGDKGFLPTLGPAWVNMYGS
TRTYTLMDEYQELNEGLGEGVSFRARLLISLGVEILDPSSPEITCSTDVQVEGVPNISET
ATGKVEEFFLFGSFLEATMVDRKIGDKPINFEVTIGYYGNEIDGIAKPQRKGKRGGGDGD
EEETELIHNSSDEEMDDDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDQ
RRRLYNANIIDNIADKLEDGLNDVQEIIKTEKSYPERRLRGVLEELSQGCSQFLSLANKD
QNQSGRTKLDRERLKLCMFEVESIGQQAKAMRSQVKKSTVRDKIKLAQNFLQKLQFLADE
PQHSVPDIFIWMISNGKRIAYARVPSKDLLYSNIDEERGKDCGKVKTIFLRIPGKKGFGP
AGWTVQSKIEIYLWLGLNRQRKDYLIGLPNGFEENKLSRGPGMPCSPPISLTYMMKQIFQ
LRVHMYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLLVFENVELFGE
ATELRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRG
NCTAGEMLAAFELLQIGPNGKADLPPIEGPTDIDRGPILPVPLGIRPVLSKYRIEVLFWG
LRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPP
LNIRVVDCRAFGRYTLVGSHAVTTLRKFIYRTTDKQANNWSTTEEIIVVNMEPEPNFKKM
ETVVKLDSCSDAVVKVEDDEKDGKGKKKKRKKGDEADEEELDESMLDWWSKYFASIETLT
EALKTQEAALSDSEDKDDMDITDGGDIKPDDSPVKGTKRGKGKKEKKKLALDSGDRRRPK
LDELKVYPKELEGEFDNFEDWLHSFNLFRGKGGDDDDQNVADEDRIVGKFKGSMCMYKVS
DDMPRDQSFDSNMGMFQNIPHNDPINILVRIYVIRATDLHPADINGKADPYIAIKLGKTE
IKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENRFY
SKHRATCGVTSNYAIHGYNVWRDPMKPTQILAKLCKEGKLDGPHYGPGGRVKVENRVFMA
QTEIEDENGLKKQTDEHLALTVLKHWEEIPRVGCKLVPEHVETRPLLHPDKPGIEQGRIE
MWVDMFPKDMTAPGPALDISPRKPKKFELRVIVWNTDEVVLEDDDIFTGEKSSDIFVRGW
LKGQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIP
ARLNLQVWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTIEMVTNETEMPMVSIFKQKR
IKGWWPFVARNEEDEFELTGKVEAELHLLTGEEAEKGPVGEGRNEPEPLEKPNRPDTSLL
WFLTPFKAIKNLVCNQYKWLTIKIVTALLLLAMLAIFLYSMPGYMVKKMLGA
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcatcgtggacacaaggaggacaggaacggagatgagccagctatt
ttggagacagagaacctggatcgtaagctcatgggaggcccagaccctgacactatctca
ttggcctcagtcacagctgtcaccaccaatgtatcaaacaaaagatcaaaaccagacata
aagatggaacccagttctggaagaccagtagattatcaagtcagtgtgacagtgattgag
gccagacagctggtgggtctgaacatggatccaatggtctgcgtggaaattggagaagat
aaaaagtacacctcaatgaaggagtcaaccaactgcccatactacaatgaatattttgtg
tttgacttccacgtgcctccagatgttatgtttgacaaaatcctgaagttgtctgtgatc
cactccaaaaatcttctgcgcagtggaacactagttggtacttttaaactggacgttggc
acaatctatggccagccagagcatcagttttaccacaaatgggctttgttgactgaccct
gaagatatcacagcagggtgcaaaggctatatcaaatgtgatgttgcggttgtggccaaa
ggagacactataaaaacaccacacaaggctaatgaatctgatgaagatgacatagaaggc
aacctcttgataccagagggggtacctgcagagcgacagtgggctcgttattacctgaag
atctacagagcggagggactccccagaatgaacacaagcatcatggccaacgttaaaaag
gcctttataggagaaaataaggacctggttgatccttatgtccaagtactgtttgctggt
cagaaggggaaaacatcagtacaaaagagctgctacgaacccatttggaacgagcaaatt
gttttcactgagatgtttccaccactttgcaaacgcatgaagatccagatccgcgactca
gataaagtgaacgacgttgctataggaacacactttctagatctacggaagatttccaat
gatggggacaaaggcttcctccccacgctcggacctgcctgggtcaacatgtatggctcc
actcgtacctacaccctgatggacgagtaccaggagttaaatgaagggctcggtgaaggg
gtgtcctttagggcccgtctactgatcagcttgggtgtggagatactcgacccctcttca
cctgagattacctgctccacagacgtgcaggtggagggagtgcccaacatctcagagact
gcaactgggaaggttgaggaatttttcctgtttggttcattccttgaggccacaatggtt
gacaggaagattggcgataagcccatcaactttgaggtcaccataggttactatggaaac
gagattgatgggattgccaagccacaaagaaaagggaagagggggggaggcgatggagac
gaagaagaaactgaactgatccacaactctagtgatgaggagatggacgatgacggcgac
ctgacttcagttgcgactactcctcccatgaaacctgtcatcactgaccgaaactacttc
cacctgccgtattttgagaggaagccatgtatctacatcaagagttggtggcaggaccag
agacggaggctgtacaacgccaacatcatagacaacattgcagataaattggaggatgga
ctgaatgatgtgcaggagatcatcaagacagaaaagtcttatcctgagcgtaggcttcga
ggtgtccttgaggagctcagccagggatgcagtcagttcctttcactggcaaacaaggac
cagaatcagtcgggcagaaccaaacttgacagggagagactgaagctgtgcatgttcgaa
gtggagagcataggccagcaagctaaagccatgagatcacaggtgaaaaaaagcacagtg
agagataaaatcaagctggctcagaacttcctccaaaagctgcagttcctggctgatgaa
ccccaacacagcgttcctgatattttcatttggatgataagtaatgggaagcgtattgct
tatgcacgcgttccctcgaaagacctcctttactctaatatagatgaggaaaggggaaag
gactgtgggaaagtgaaaacaatctttctgaggatcccaggtaagaaaggttttgggcct
gctggatggacggtgcagtccaagatagagatttatctgtggctgggtctgaataggcag
cgcaaagactacctgatcggtctgcccaatggatttgaggaaaataagttgtccagagga
cctggcatgccgtgctcaccgcccatcagcctcacctacatgatgaaacagatcttccag
ctgagggtccacatgtaccaggctcgcagcctgtttgcagctgacagcacaggattgtct
gatccctttgcgagagtcttcttctcaacacaaagtcaggtcactgaggtgctggccgag
actctctgcccaacttgggaccagctgctggtttttgagaatgtggagctgtttggagag
gccaccgagctgcgagacgaccctcctattatcgtgattgaaatctatgatcaagacaca
gtgggtaaagctgacttcatgggcagaacttttgccaagcctgtggtcaagatggcggac
gagcactacggccccccacgcttccctcctcaactggagtactatcagatctaccgtggg
aactgcacagctggagaaatgttggcagcttttgagctgttgcagattggccccaatggg
aaagctgacctgccaccaatagaaggtcctacagatatagaccgcggcccaatcctgcct
gttcccctgggaatcagaccagtgctcagcaagtacaggattgaggtgttgttctggggc
ttgagagacttgaagagggtgaatctcgctcaggtggacaggccccgtgtggacatcgaa
tgtgccggcaagggagtgcagtctgccctcatccccaactacaagaaaaaccccaacttc
agcacccttgtcaagtggtttgaagttgatttgccggagaatgagttgctccacccacct
ctgaacatccgagtggtggactgcagggcttttggccgctacactctggttggctcccat
gctgtcaccacactgcggaagttcatctataggacaacagacaagcaggccaacaactgg
tccactacagaggaaattattgttgtcaacatggagcccgagcctaattttaagaagatg
gaaactgtagtcaaacttgactcgtgctccgatgctgtggttaaagttgaggatgatgaa
aaggatgggaaggggaaaaagaagaagaggaagaagggtgatgaggctgacgaagaggaa
cttgacgagagcatgctggactggtggtccaaatattttgcctccattgaaactttgaca
gaggcgctcaagacccaagaggcagctctctcagattcagaggacaaagacgacatggac
attacagatggtggagatatcaaacctgatgactctcctgtgaaaggcaccaagagagga
aaaggaaagaaggaaaagaagaagctagcacttgattcgggagataggagaaggccaaag
ctagatgagctaaaggtgtatcccaaggaactggagggtgaatttgacaactttgaggac
tggctgcacagttttaacctgttcaggggaaagggtggcgatgacgacgaccaaaatgtg
gctgatgaagacaggattgttggaaaattcaaaggctcaatgtgcatgtacaaagtatca
gatgatatgcccagagaccagagctttgactccaacatggggatgtttcagaacatccct
cacaacgatccaattaacatcctcgtccgcatctatgtcatcagggcaactgatctgcat
ccagcagacattaacgggaaagctgatccgtacattgcaatcaaactgggaaagactgag
atcaaagacaaagagaactacatctccaaacagctgaaccctttgtttggcaagtctttt
gatgttgaagccacattcccaatggattccacactaacggtgtcgatttatgactgggat
ctggtggggactgatgatctgattggggaaaccaaactcgatcttgagaaccgcttctac
agcaaacacagagccacatgcggtgtcacgagtaactacgccatccatggttacaatgtt
tggagggacccgatgaaacccacacagatcttggctaagctgtgcaaggagggcaaactg
gatgggcctcactacggccctggaggaagagtgaaggtggagaaccgtgtcttcatggca
cagactgagatcgaggatgaaaatggtctgaagaagcagacagatgaacatctggctctg
accgtgttgaagcattgggaggaaatcccgcgggtgggatgcaaacttgtcccagaacat
gtggagaccagaccacttctgcaccctgataaaccaggaattgaacaagggagaattgaa
atgtgggtggatatgttccctaaggatatgactgcacctggtcctgcccttgacatttca
ccacgtaaaccgaagaagtttgaactgagggtgatcgtttggaacacagatgaggttgtc
ctagaggatgatgatatcttcactggagagaaatcaagtgacatttttgtgagaggttgg
ctgaaaggacagcaagaggacaagcaggacaccgatgtccattaccactccattactggg
gaaggcaacttcaactggcgctttgtctaccccttcgactacctcatggctgaagagaaa
atcgtcatctctaaaaaagagtccatgtttgcctgggatgagaccgagtacaagatccca
gctcgtctgaatctgcaagtgtgggacgctgatcacttctcagcagatgacttcttaggt
gcgattgagctggacctgaaccgtttcccgcgtggtgctaagactgccaagcagtgcacc
attgagatggtgacaaatgaaacagagatgcccatggtctccatcttcaaacagaagagg
atcaaaggctggtggccatttgtggccagaaatgaagaagatgagtttgaactcacagga
aaggtggaagcagaactgcaccttctgacaggagaggaggctgagaaaggccccgttggt
gaaggacgcaatgaaccagagccactggagaaacccaaccgtccagacaccagccttctg
tggttcctcactcccttcaaagccataaaaaatttggtctgcaaccagtacaagtggctg
accatcaagatagtcacagctctcctgctgctagccatgctagctattttcctttacagc
atgcctggttacatggtcaaaaaaatgctgggcgcttga
DBGET
integrated database retrieval system
