Scomber scombrus (Atlantic mackerel): 134001327
Help
Entry
134001327 CDS
T10651
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
134001327 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
134001327
NCBI-ProteinID:
XP_062296877
LinkDB
All DBs
Position
19:complement(20192190..20207749)
Genome browser
AA seq
462 aa
AA seq
DB search
MSSGGPPQSPAVAKSEVAVEGECPLLAATFAYWDNILGPRVRHIWVPKGDQVMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHTICVERLKHVIRKGRIWMQKGFNIISVLSLEIVPIMELLASMKTHSVPEDV
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFIQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSTLWKTDSEEEIPPDTIIHTDETFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDDTQKGKKPFRSLRNLKTDLDL
TVEGDLNIVMALAEKLRAGLHSFVFGKPFYTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggcggtccccctcagtcacctgctgtggcaaagtctgaggtagcagtagag
ggagaatgcccactgctggctgccacctttgcttactgggacaacatcctgggtcctcgt
gtgcgccacatttgggttccaaagggcgatcaggtgatgttcctcagcgatggagaggtg
acctttttggccaatcatacacttaacggggagattctgcgcagcgccgagtgtggcgcc
gtggacgtgaagttctttgtcctggcggagaagggcgtcatcatcgtgtctctcatcttc
gatggcgaactgaagggggacaagaacacgtgtgccttgtccatcattctgcctcagacg
gagctggccttctacctgcctttgcacactatctgtgtggagaggctgaaacatgttatc
cgcaagggacgcatttggatgcagaagggcttcaatatcatctcagtgctaagtctggag
atcgtccctatcatggagctgttggcctccatgaagacacacagtgtgccagaggatgta
gatataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctccagacttgcggctgttcaatagtggtcggaagc
aacccggagaaagtaaacaagattgtgcggacactttgcctcttcctcacccctgccgag
aggaaatgctctcgcctctgcaaggctgactcctccttcaaatatgacacgggcctattt
attcagggtctgctcaaggactccaccggcagcttcgtcctgcccttccgccaggttctc
tactcgccttacccaacaacgcacatcgacgtcgacatcaacacggtcaagcagatgccg
ccgtgtcacgaacacacttacaaccagcgccgctacatgaggtccgagctgagcacgctc
tggaagacagacagcgaggaggagataccgcctgacacaatcattcacaccgatgaaacc
ttcacacctgacctgaatatatttcaagatgtcatgcataaagacactttggtgaagtca
tttatagacgaggtgttcatgctgaagccgggcctgtccctgcggagcacttacctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaaatacatcgaggacgac
acgcaaaaagggaagaagccgtttcggtccttgcgcaacttgaagacggacctggatctg
acggtggaaggagacctgaacattgtaatggccttggctgagaagctgagggcaggactg
cactcgtttgtgttcgggaagccattctacaccagcatgcaggagcgagatgtgctcatg
agcttttga
DBGET
integrated database retrieval system
