Scomber scombrus (Atlantic mackerel): 134003214
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Entry
134003214 CDS
T10651
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
134003214 (lgi1b)
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GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_1
LRRCT
LRR_9
Motif
Other DBs
NCBI-GeneID:
134003214
NCBI-ProteinID:
XP_062298331
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Position
21:complement(13678189..13689365)
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AA seq
550 aa
AA seq
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MGYPGRTVRGWRGWKVWTLLVWVAAVCLVLADGRRVRQPRCPAGCTCTKDNALCESVRSV
PHTFPSDVVSLSFVKSGFNEISGGSFVHTPALQLLLFTANSFDLIDEDAFQGLPHLEYLF
IENNRISTISPYAFRGLKALIHLSLAYNNLEMLPKDVFKGMDALTKVDLRGNNLVCDCKL
KWLVEWMHHTNATLDQIYCSGPPIHQGKKINDLLPHSFDCITAEFASYQSLKFESISVEA
FTFGKDQYVVFAQPFAGTCSLLEWDHVEMTFRTYDTIESTSTVVCKPMVIDNHLFVIVAQ
LFGGSHIYKRDTSANKFIKIQGIDILTIRKPNDIETFMVDGESFFVIADSSKAGSTTVYK
WNGNGFYSHQSLHPWFRDTDVEYLEISGKAHLILSSSSQRPVVYQWNRSQKQFDRRTDIP
EMEDVFSVKHFRVKGDLFICLTRFIGDSKVMRWDGAMFTEVQTFPSRGSMVFQPVSIGNW
QYAILGSDYSLTQVYQWDPKRGQFVPSQELNIQSPRAFSLVSIDDRVFLFASSFKGKTQI
YEHLMIDLSN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggatacccgggcagaacggtgaggggatggagaggatggaaagtatggacgctcctg
gtttgggtggccgctgtctgtttggtcttagcagacggacggagagtgaggcagcccaga
tgtcccgctggatgtacctgcaccaaagataatgccctgtgtgagagtgtccgatctgtg
cctcacactttcccttccgacgtcgtttcactatcttttgtcaagtctggatttaatgaa
atctctggagggagctttgttcatacacctgccctgcaactgctattgttcacagcaaat
tcctttgacctaatagatgaggatgcgttccaaggtttaccacatcttgaatatctattc
attgaaaataacaggatttcaacaatatccccatatgcgttccggggccttaaagcactg
atacatctgagtctggcatacaacaaccttgagatgctgcccaaagatgttttcaagggc
atggacgctttgaccaaagtggatctgagaggaaacaacctggtatgtgactgcaagctc
aagtggctggtggagtggatgcaccataccaacgccaccctagaccagatctactgcagc
ggtccacccattcaccaggggaagaagatcaatgacctgctgccacactcttttgactgc
atcacagcagagtttgcctcctatcagtcgctgaagtttgagtctatttcggtggaggcc
ttcacctttggcaaagatcagtatgttgtgtttgcccaaccatttgctgggacatgcagt
ctcctggaatgggatcatgttgagatgaccttcagaacctatgacaccattgaaagcact
tccactgtggtctgcaagcccatggtgattgacaaccacctctttgtcattgtggcccaa
ttgtttggtggctctcacatttacaaacgtgacacctctgccaacaagttcatcaaaatc
cagggcattgacatcctgacgattcgcaaacccaacgacatcgagacctttatggtcgac
ggagagtcgttctttgtcattgctgacagctctaaggccggctccacaacagtgtacaaa
tggaacggcaacgggttctactctcaccagtcacttcacccgtggttccgagacaccgat
gttgaatatttggagatttccggcaaagcccacctgatcttgtccagcagctcccagagg
ccagttgtgtaccagtggaacaggagccagaaacagtttgaccgcaggactgacatacca
gagatggaggacgtcttctccgtcaaacactttcgggtcaaaggtgacctgtttatatgc
ctgacaagattcatcggggactccaaggtgatgcgctgggacggtgccatgttcacagag
gtccagacatttccttcccgtggctctatggtgttccagcccgtctccatcggcaactgg
cagtatgccatcctaggtagcgattattcactgacgcaggtctaccaatgggaccccaag
aggggccagtttgtcccatctcaggagctgaatatccagtcgcctcgggcattttctctg
gtatctattgacgaccgggtgttcctgtttgcatccagcttcaagggaaaaactcagata
tatgagcacctcatgatagatctgagtaattaa
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