Scomber scombrus (Atlantic mackerel): 134003332
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Entry
134003332 CDS
T10651
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134003332 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134003332 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134003332 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
134003332 (plekhm1)
Membrane trafficking [BR:
ssco04131
]
SNARE
SNARE associated proteins
Others
134003332 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
134003332 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
134003332
NCBI-ProteinID:
XP_062298478
LinkDB
All DBs
Position
21:21719420..21738507
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AA seq
1086 aa
AA seq
DB search
MLATQMPDTPQEAKDVKQIKDKLAQSLKALQKRYVTSDAVVTSEDGDANLLCSALEAIFI
HGIKSKFIRTEAGGRSRKGDRGPLPQPFFWNLLKTVTHRDVITELEKISFVGTDVGRCRA
WLRLALNHGLLECYLVSLFRENSKLRAHYQPSALLLNAEEREVLLSYLQGLASLTFSLSY
KSAVLNEWTNTPLALAGLCPLSQADVLDLPLNGGGDHSTSKPSYKESWDTVSQSSSSSDA
PDMQRGCPVLTGRGSSALQGGRTALNSSNLSLDTTGSSQLSSSLSSDSLLQGQDPRSPTG
EQWSSCDLDLNTNTKRAQKDSLTDYRESGHCSQDSMREDSFVSSTGPDQLSDTAVFIGSD
SETQSPATPSQEFSEPPREPALLSDPEPPPTSADPPLPHENHINQAPSLDCNNVSSEFDA
QSELVEPAEREQTTRAEDSSELIQKEKEAESLEKSSESSVRPVTLRSTSMLSRKLSSDSL
SLPHSWISEDDIYKPHLEEVSDQEEFLPSAPTPEPKVSQSPPSVVHRRQTGQFNPFRGLL
KLGHLERRGAMGLWRDHYCELSPFEFRLYLNAEERTCCDNCSLVRCEDVRITTSEGRFEL
FFPGKRLYLRAANHDEAEDWVDRIVEAVNKCRPVSRVDEQWEVLQPTAENGVDDRTLSSA
SSAPSSPERGILSSDTGTGRGQETPPPPQEFNWTRAADVESDAIKEAVLYLSTDPEARTW
VPLVFSLSLEALKGFRVQEGRKLLRLTHSIEEIRDVVPDVSVGGPAFFKLLTVKETLRLR
AENAEEARSWRSLIRGALDSYLDSGEDGGSEDTTASSRLQGVTGNLHRLVQHRLKEDGSL
LVHLCTVPSEKGLDTQNFKCAGCPQLIGPSRSRARLCEFSGQHYCESCHHGDTTIIPSRM
VHNWDLRQREVSKKAQWLLAQVELEPLLNLEQLNPELEKHSESMCQAHSLRQRLRLLGDY
LLTCRSGACKKLQAKMKQRTYLLESSHLYSVMDLRQIAEGEYATYLNTFLQYASNHVFHC
DLCTQRGFICQICHTDDIIFPFQFDSTTRCKDCKAVFHLACKAPGDSCPRCLRMRKYLER
DLQDLL
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgctagccacacagatgccagatacgccacaagaggctaaagatgtcaaacagatcaaa
gacaagttagcgcagtcgctcaaggccctgcagaagcgctacgtgacgtcggacgccgtg
gtaaccagcgaagatggcgacgctaacctcctctgctccgccctggaggccatcttcatc
cacggtatcaagagcaagttcatccgcactgaggccggcggtcggagcaggaaaggagac
agaggaccccttcctcagccgttcttctggaacctcctcaagaccgtcacccaccgcgat
gtgatcacagagctggagaagatcagcttcgtgggcacggacgtgggtcgctgccgtgcg
tggctgcgtctggccctcaaccacggcctgctggagtgctacctggtctcgttgtttcgg
gagaactctaagctgcgggcgcattatcagcccagcgccttgctcctgaacgcggaggaa
cgagaggttctgctcagctacctccagggtctcgcctcgctcaccttcagcctttcttac
aagtccgccgtcctcaacgagtggaccaacacacctctggccctcgccggactctgcccc
ttgtcccaggcagatgtgctcgacttgcccctcaatggcggaggagaccactccacctcc
aaaccctcgtacaaagaatcatgggatacagtatctcagtcgtcaagctcatcggatgct
cctgatatgcagagagggtgtccggtgctgacagggaggggttcaagtgcgttacaaggg
ggtcggactgcactcaattcctctaacttgagcctggacactacaggctcctctcagctc
tcctccagtttgagctccgacagcctcctgcagggtcaagacccccgcagccccacgggg
gagcagtggtcttcatgtgacctggacctgaatacgaacaccaagagggctcagaaagat
tcgctgactgactatcgggagagcggccactgcagtcaggactccatgcgtgaagactcc
ttcgtctccagcacgggtcccgatcagttatctgacacggccgttttcatcggctccgac
agcgagacccagagtcccgccacgccatcgcaagaattctcagagccgccacgagaacct
gcgctgctttctgatccggagccaccgccaacatccgccgacccaccgctaccccacgag
aaccatattaaccaggctccctctttagactgcaataatgtctcgtcggagtttgatgca
cagtccgagcttgtggagcctgcagagagagaacaaacaacacgtgcagaggacagtagt
gagctcattcagaaggagaaggaggcagagagtttggagaagagctccgagtcttcagta
cgtccggtcacacttcgctccaccagcatgctgagcaggaaactgtcctcagattcacta
tcactcccccattcctggatctcggaggacgacatctacaaaccacatctggaggaggtg
tccgaccaggaggagtttcttccttccgctcccacgcctgagcccaaagtctcccagtca
cctcccagcgtcgtccatcgcagacagacagggcagttcaacccgtttcgaggcttgctg
aagctcggccacctggagcggcgaggcgcgatgggactgtggcgcgaccattactgcgag
ctctctccctttgagttccgcctctacctcaacgcggaggagcggacgtgttgcgacaac
tgctccctggtgcgatgcgaggacgtgcgcatcaccacgtccgaaggccgcttcgagttg
ttcttccccgggaagcgactctacctccgggcggccaatcatgacgaagcggaggactgg
gtggaccggatcgtagaggccgtcaacaagtgccggccggtgtctcgcgtggacgagcag
tgggaagtgctgcaacccaccgcagagaatggagtggatgatcgtacactttcctccgca
tcctccgccccctccagccctgagcgaggcatcttatcctccgacacggggacaggaaga
gggcaggagacgccgcctcctccacaagaattcaactggactcgggcggctgatgtagaa
tcagacgccatcaaagaagctgttttgtatttatctacagaccctgaagctcggacatgg
gtccctctcgtgttctcgctctccttggaggctctaaaaggctttcgggtgcaagaggga
agaaagctgctccggctaactcactccatagaggagatccgcgacgtggttcccgacgtc
tctgtaggagggccggccttttttaaactcctcaccgtcaaagagacgctccgactgcgg
gcggagaacgctgaagaggcgcgctcttggaggagtctgatccgaggagctctggactcg
tatctggacagcggagaggacggaggctccgaggacacgactgcatcctcacgtctgcaa
ggggtgacgggaaatctccacagactggtgcagcacagactgaaagaagacgggtcgctc
ctggttcacttgtgcaccgtgccctccgagaaggggctggatactcagaacttcaagtgt
gcaggctgtcctcagctgatcggaccgtcccggagcagagccaggctatgcgagttttcg
ggccagcactactgcgagtcctgtcaccatggcgacactaccatcataccttcacgcatg
gtgcacaactgggacctcagacagcgagaggtgtctaagaaggcccagtggctgctggct
caggtggagctggagcctttgttgaacctggagcagttgaaccctgagttggagaagcac
tctgagtccatgtgtcaggctcacagcttgaggcagagactacgtctgctgggagattac
ctgctgacctgccgcagcggagcctgcaagaaactccaagccaaaatgaagcagcgaacg
tacctgttggagtcgagccatctttacagcgtcatggatttacgacaaatagcagagggc
gaatatgcaacctacctgaacacatttctgcagtacgcctccaaccacgtgttccactgt
gatctgtgcacgcagcgcggcttcatctgccaaatatgccacactgatgacatcatcttc
cctttccagttcgacagcaccaccaggtgtaaagattgtaaagccgtgtttcatctggcc
tgcaaagctccgggagactcctgtccacgctgtctacgaatgaggaaatacctggagagg
gatctgcaggacttactgtaa
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