Scomber scombrus (Atlantic mackerel): 134003750
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Entry
134003750 CDS
T10651
Symbol
mtr
Name
(RefSeq) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00270
Cysteine and methionine metabolism
ssco00450
Selenocompound metabolism
ssco00670
One carbon pool by folate
ssco01100
Metabolic pathways
ssco01230
Biosynthesis of amino acids
ssco04980
Cobalamin transport and metabolism
ssco04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
134003750 (mtr)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
134003750 (mtr)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134003750 (mtr)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
134003750 (mtr)
04980 Cobalamin transport and metabolism
134003750 (mtr)
Enzymes [BR:
ssco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
134003750 (mtr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
MtrH
Motif
Other DBs
NCBI-GeneID:
134003750
NCBI-ProteinID:
XP_062299042
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Position
21:1952097..1989679
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AA seq
1269 aa
AA seq
DB search
MSPTNVIHQFSSQAECSCPLELELRALLQQRIMVLDGGMGTMIQRQKLEEEHFRADEFKE
HHLSLKGNNDLLSITQPEVIYNIHKEYLLAGADIIETNTFSSTSIAQADYGLEHMAYRLN
KVSAELARRAADDVTKQTGCKRYVAGAVGPTNKTLSVSPSVERPDFRNTTFDEMVEAYSE
QVRGLLDGGADVLLVETIFDTANAKAALFAIDLLFEKSYERRPIFISGTIVDRSGRTLSG
QTGEAFVVSVSHAKPLCIGLNCALGAPEMRPFIEAIGKSTTAFIICYPNAGLPNTFGDYD
ETPAVTASNLKEFATDGLVNIVGGCCGTTPEHISAICEAVKHCQPRVPAADIYQDYLLLS
GLEPFRIGPYTNFVNIGERCNVAGSRKFAKLIMAGNYEEALSIAKTQVEMGAQVLDINMD
EGMLEGPTAMTRFCNYIASEPDISRVPLCIDSSNFSVIEAGLKCCQGKCIVNSISLKEGE
EEFLLRAATVKRYGAAVVVMAFDEEGQATDTERKVEICTRAYKLLVSKVGFDPNDIIFDP
NILTIGTGMEEHNQYAVNFIRATKLIKETLPRARVSGGLSNLSFSFRGMEAIREAMHGAF
LYHAIKDGMDMGIVNAGNLPVYDDIDKDLLLMCENLIWNRDTEATDKLLNYAQNNMKGGK
KVVQTDEWREGNVEERLEYALVKGIEKYVVEDVEECRIQVDRYTRPLHIIEGPLMNGMKV
VGDLFGAGKMFLPQVIKSARVMKKAVGHLIPFMEKEREEMMALSGSTEEVDPYQGTIVLA
TVKGDVHDIGKNIVGVVLGCNNFRVIDLGVMVPCEKILREALREKADIIGLSGLITPSLE
EMIYVAKEMERLGMTLPLLIGGATTSKTHTAVKIAPRYTCPVIHVLDASRSVVVCSQLLD
ENVKEEYFEDLKEEYEDIRQDHYDSLKDRRYLSLSQAREKALHIDWLSLPRPVRPQFLGS
RVFECYDLNSLVDFIDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGLEARRVFDDAQRLLN
RMIDSSGLKGRGLVGFWRAQSDGDDIKMYKDDVKVHRDTKPIATFHGLRQQVEKDSSSSE
PYLCMSDFVAPIDSGVTDYIGMFAVGVFGAEELSQQFQSKGDDYNSIMVKALADRLAEAF
AEELHSRVRKELWGYSADETLQASDLHRIRYQGIRPAAGYPSQPDHTEKITMWNLADIKE
KTGICLTESLAMLPAASVSGLYFSNPQASYFAVGKITKEQVEDYARRKEMSVEEVERWLA
PILGYNSEA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaactaacgtcattcatcagttctcttcacaagcggaatgcagttgcccattg
gagttggagctgcgagcactgctgcagcaaaggattatggtcctggatgggggtatggga
accatgatccagcggcagaagcttgaggaggaacatttcagggcggacgagtttaaagag
catcatctgtcactgaagggaaacaacgacctgctcagtatcacacagcctgaagtcatc
tacaacatacacaaggagtacctgctggccggtgctgacatcatagagaccaacacattc
agcagcacctccatcgctcaagcagactatggattggaacatatggcttatcgcctcaac
aaggtatcagcggagctggcgaggagggcagccgatgatgtcaccaaacaaactggttgt
aaacgctatgtggccggggcagtgggtcctaccaataaaactctgtctgtgtcaccgtct
gtggagagacctgacttcaggaacaccacctttgacgagatggtagaagcctactcggag
caggtcagaggtttattagatggaggagcggacgtcctcttggttgaaaccatcttcgac
actgccaacgctaaggctgccttatttgccattgacctgctctttgaaaagagctatgaa
aggagacctatatttatctcagggaccatagttgaccgcagtggaagaactctgtccggt
cagacaggagaggcgtttgtagtgagtgtatcacacgctaaaccactatgtattggtcta
aactgtgccttgggggccccggagatgaggcccttcattgaggccattggaaaaagtacc
acagctttcattatctgttatcccaatgcaggtcttcccaacacatttggagattatgac
gaaactccagcagtaacagcctccaatttaaaggagtttgctacggacggactagtgaat
attgtgggaggctgttgcgggaccactccagaacacatcagtgccatatgtgaagcagtc
aaacactgccagccaagagttcctgctgctgatatttatcaagactacttactgctctca
ggtttagagccattcaggatcggtccttacaccaacttcgtaaacattggcgagcgctgc
aacgtggccgggtcacgcaagttcgccaagctgatcatggccggaaactacgaggaggct
ctaagcatcgctaagacccaggtggagatgggagcgcaggtcctggatataaacatggat
gaggggatgctggaggggccgacagccatgacgcgattttgtaactacattgcatccgag
ccagatatctcaagggttcctctgtgtatcgactcctctaacttctcagtgattgaagct
gggttaaaatgctgtcaggggaagtgtatagtgaacagtatcagtctgaaggaaggggag
gaggagttcctgctcagagctgccactgtgaaacgctacggagctgctgtggtggtcatg
gcgttcgatgaggaaggacaggccacagacacagagcgtaaagtggagatctgcactcga
gcctacaagctgctggtcagcaaggtagggttcgatcccaacgacatcatcttcgacccc
aacatcctcaccatcggcacgggcatggaggaacataaccaatacgctgttaacttcatc
agggccaccaagcttatcaaggagacattaccaagagccagggtgagtggaggtctgtcc
aacctgtccttctccttcagaggaatggaggctataagagaagccatgcacggagctttt
ctctatcacgctatcaaggatgggatggatatgggcatagtgaatgctgggaacctgcca
gtgtacgatgacatcgataaagacctgctgttaatgtgtgaaaatctgatctggaacaga
gacactgaagctactgacaaactactgaactacgcacagaacaacatgaaaggagggaag
aaagtggttcagacagacgagtggagggaaggaaacgtggaggagaggctggagtatgct
ctcgtcaagggaatagagaagtatgtggtggaggatgtggaggagtgtcggattcaggtt
gaccgctacactcgaccccttcatatcatcgagggccccctgatgaacggcatgaaggtg
gtgggagatctctttggtgctgggaagatgttcttaccacaggtgatcaaatcagctcgt
gttatgaagaaggcggtgggtcacttgattccttttatggagaaggagagggaggagatg
atggcgttatcagggtcaactgaggaagtggatccctaccagggcaccatagttctggct
acagtgaagggagatgtccatgatattggcaagaacatcgtaggtgtggtgctgggttgc
aacaacttcagagtgatcgacctgggtgtgatggttccctgtgaaaagatcctcagagag
gccctcagagagaaagcagatatcattggtttgtctggtctcatcaccccctctctggag
gagatgatctatgtggccaaagagatggagagactgggaatgacattgccactgctgatc
ggaggagccaccacatcaaaaacacacacagcagtgaagatcgccccacgctacacttgc
cctgttatccatgttctggatgcctccagaagtgtggtggtgtgctcccagctcctggat
gagaacgtgaaggaggagtactttgaagacctgaaagaggagtatgaggacatcaggcag
gaccactacgactccctgaaggatcgtcgttatctgtctctgtcccaggccagagagaag
gctttacatatagactggctctctctgccccgtccagtgcgtcctcagttcctgggcagc
cgtgtgtttgagtgttatgacctgaacagcctggtggacttcatcgactggaagcctttc
tttgacgtctggcagctgagaggaaaataccccaacagaggctaccccaagatcttcaaa
gacaagacagtcggtttggaggcgcggcgagttttcgatgacgcccagcggctgctcaac
agaatgattgacagctccggtctgaaggggcggggtctggtggggttctggcgtgcgcaa
agcgacggcgacgacatcaagatgtacaaagatgatgtcaaggtgcacagagacaccaag
ccgatcgccacattccacggcttacggcaacaggtggagaaggacagctccagttcagag
ccctacctgtgtatgtctgacttcgtggctcccatagacagcggtgtcacagactacatc
ggcatgtttgctgtgggcgtgtttggcgctgaggagctgagtcagcagttccagtcaaag
ggagacgactacaacagcatcatggtcaaagctctggctgaccggctggctgaggcgttt
gctgaggagctccactctcgtgtgaggaaggagctgtggggttacagcgctgacgagaca
ttgcaggcctcagaccttcacaggattcgataccagggcatcagacctgctgctggctac
ccaagccagcctgatcacactgagaagatcaccatgtggaacctggctgatataaaggag
aaaactggtatttgtctgacagagtctctggccatgttgcctgccgcctcagtgtctgga
ctttacttctccaaccctcaggcctcctactttgctgtaggaaagatcaccaaagagcag
gtggaggattacgccaggaggaaagagatgagtgtggaggaggtggagagatggctggct
cccatactgggttacaacagcgaagcctaa
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