Scomber scombrus (Atlantic mackerel): 134004227
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Entry
134004227 CDS
T10651
Symbol
apaf1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04115
p53 signaling pathway
ssco04210
Apoptosis
ssco05168
Herpes simplex virus 1 infection
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NCBI-GeneID:
134004227
NCBI-ProteinID:
XP_062299410
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Position
22:complement(16796470..16840900)
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AA seq
1258 aa
AA seq
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MALEEGARSCLLRFRKKLEQDIKPSYLMDHMISDDVLTVDEEEKIKFQPTRKDQAVALLE
LLLRKDNRAYISFYNALIKEAYDDLANLLHDNLPRISPEAYKSTSDTFTSYVQTVLSEGG
VPQRPVVFVSRPAMVNQIRDKLYRLQKEPGWITVFGMAGSGKSILAAESVRHQGLIEECF
PGGIHWLSIGQLDKPDLLVKIQSLCFRLEQSLDAQSLHRPPNSLDEAKERLRFLMLRRYP
RSLLILDDVWESTVLKVFDVQCRILFTTRNRSLTDSVSGVKYGVEVESGMDENKGLEILA
LYTNNKPQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRWRYYLCQLQQKQFKRIRKS
SSYDYDALDQAMAASIEVLPDEHQELYKDLTVIEKDIKVPAKVLSILWDLEPEEVEDILE
EFVNKSLLFMDSNHKPYLYYLHDLQLDFLEEKNRTQLESLHSKVVRQYQQHYRDGPPTSG
DDECLYWIRFLTYHMAKGNLSQELNSLMFSLDWVRIKAQIMGPAHLINDYVEYGPILDKE
NSEVRSQFQEFLSLNGHQLEQRPFPDVVQLALSQPHTSEVYQQALLQAQERASTGKLYFD
WLNKSSLESLSRLVIHPHQGSIYSACFSHDGAKIASCGASKTLKVFKSTSGEKLTEIQAH
DDEVLCCAFSPDDHLLATCSSDRKVKVWNVERAMLLRVFDVEHEEQVNHCEFTNTTRRLL
LATCSNDKCLNVKLWNLNKPSSQNTMFGHFESVNHCCFSPDDAFLSTSSNDGTVKLFDAS
SANEWKTIDVRSMFTDNDEEVFVKCSTWTADGKRIICAARNAALVFDVETSDMLLEIRTN
RLSTVQYCQACPTSNLLAIAFSNYAVELWDLEANKKMADLSGHLSWVHRVQFSPDGSQLL
SCSDDQTVRLWETNKVHTSSAVCLKRDSDVLFNDEQIIVSAADNCNRLQVRDGRTDSVLF
QSEEKPSRIRCTCMCRQPSAVVLGQEDGTVQVLEVPSGKILATLLGHTKTVLHCQFSQNG
QTLITSSEDTTIRVWRWQSGECKVLKGHKEQIRCFSLLSTSPADTRLLSWSFDGTIKVWD
VESGEKLQDTEAHQGAILSCHVSPDGCLFATTSADKTAKLWGCDSWQCIHTLSGHQDCVR
SCRFSWDSRRLATGDDNGEIRLWSVNDGTLLKICSRDGKDGMDSLHGGWVTDLHFSPDNS
LLVSTGGYIKWWDVERGEALQTFYPSGCALKRIHVSSDFSTFVTIDNIGILYILQRVV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggaggaaggggcacggagctgtctgttgcgcttccgcaaaaaactagagcag
gacatcaagccctcttacctgatggatcacatgatcagtgatgatgtgctgacagtggac
gaggaagagaagatcaaattccagcccaccaggaaagatcaggctgtggccctactggag
ctgctgctgaggaaagacaaccgtgcctatatctccttctacaacgccctgatcaaggag
gcatacgatgatttagccaatctgcttcacgataatctgccacgcatctcacctgaggca
tataagagtacctctgataccttcacatcctatgtccaaacggtgctaagtgagggcggt
gtaccccagaggcctgttgtatttgtcagcagaccggcgatggtgaaccagatcagggac
aaactttaccggctccagaaggaacctggctggatcactgttttcggcatggctggctca
ggcaaatctatcctggctgctgagtctgtcagacaccaaggacttatcgaagagtgcttt
cccggaggcatccactggctgtccatcggccagctggacaaacccgacctgctggtgaag
atccagtcattgtgcttccgtctggagcagagcctggatgcccagtccctccaccggccg
cccaactctttggacgaggccaaggaacgcctacgcttcctcatgctgcgcagatatccg
agatctctgctgattcttgatgacgtctgggagagcacagtgctaaaggtgtttgatgtc
cagtgtcggatacttttcaccaccagaaatagaagccttactgattcagttagtggtgtt
aaatatggggtggaagtggagagtggtatggatgaaaacaaaggactggagatcctcgct
ctgtacactaataataaaccccaggggctacctgaggaggctcgcagcattgtcagagaa
tgtaaaggctcccctctggtggtgtcccttatcggggctttactcaaagagaagcccaac
cgttggcgttactatctctgccagctgcagcagaagcagttcaaacgtataaggaaatcg
tcctcttatgactacgatgccctggaccaggccatggctgcaagcattgaggttctacct
gatgaacatcaagaactatacaaggaccttactgtgatagagaaggacatcaaagtccct
gctaaggtgctgtctatcctgtgggacctggaaccagaggaagtcgaggacattctcgaa
gagtttgtcaacaaatctctgctttttatggacagtaaccacaaaccttacctgtactac
ctccatgacctccagctggacttcctggaagagaagaatcgcacccagctagagagcctt
cacagtaaggtggtgcgtcagtaccagcagcactacagagatggacctcccacttcagga
gatgatgaatgtctctactggatccgattcttgacttaccacatggccaaaggcaacctc
tcccaggagcttaattccctcatgttttctctggactgggtccgcataaaagcccaaata
atgggtccagctcacctcatcaatgactacgtggagtatggacccattctggacaaagag
aacagtgaagtacgcagtcagttccaggagtttctgtctctgaacggccaccaactggag
caacgtcccttccctgacgtggtgcagcttgctctgtctcagccacacacctctgaggtc
taccaacaggctctgctgcaggcgcaggagagggccagtaccgggaaactctactttgac
tggctgaataagagcagtttagagagcctgtcccgtctggtgatccacccccaccagggc
tccatctattctgcctgcttctcccacgatggagccaagatcgcctcctgtggagccagc
aagactctcaaggtatttaaaagcacctcgggtgagaagctcacggagatccaggcccat
gatgacgaggtgctctgttgtgccttttcccctgatgaccatctcctagcaacctgctcc
agtgacaggaaagtaaaggtatggaatgtggagcgagccatgctgctgagggtctttgat
gtggagcatgaggagcaggtcaaccactgtgagttcaccaacacaacacgacgcctcttg
ctggccacctgctccaacgacaagtgcctgaatgtgaagttgtggaacctcaacaaacca
tcgtcacagaacaccatgtttggccactttgagtcagtcaaccactgctgtttctcccct
gacgacgcctttctgtccacctcctccaacgacggtaccgttaagctgtttgacgcgtcg
tccgccaatgagtggaagacaatcgacgtgaggagcatgttcacggataacgatgaagaa
gtcttcgtcaagtgcagcacctggactgctgacggcaaacgcatcatatgtgctgccagg
aacgccgctttggtgtttgacgtggagacatcagacatgttgttggagatcaggaccaat
cgtctgagcacggtgcaatactgtcaagcctgtccgactagtaacttgctggccatcgcg
ttctcaaactacgctgtggagctgtgggacttagaggccaataagaagatggctgacctc
agtggtcacctgagttgggtccaccgtgtccagttctcccccgacggctcacagctgctc
tcctgctctgatgaccaaactgtcaggctatgggagactaataaggtgcacacctcctca
gccgtctgcctgaagagagactctgatgttctcttcaatgatgaacaaatcatagtgtcg
gctgcagacaactgcaacagactgcaggtgcgtgatggcagaacagattcagtactgttc
cagtcggaggagaagccatccaggatccggtgtacttgcatgtgcaggcagccctctgct
gtggtcctgggccaagaggatggcactgtacaggtgttggaggtgccatctgggaagatc
ctagccactctgctgggacacaccaagacggtgctgcactgccagttcagtcagaatggc
caaacactcatcacatcttcagaggacaccaccataagggtgtggaggtggcagtcaggg
gagtgtaaagtcctgaagggtcacaaggagcagatcagatgcttctctctgctctccacc
tcacctgctgatacaagactgctgtcctggtccttcgatggtaccatcaaggtgtgggat
gtggaaagcggagagaagctgcaggacaccgaggctcaccaaggcgccatcctgtcatgt
catgtctcgccagacggatgcctcttcgccaccacctctgctgacaagactgctaagttg
tggggctgtgactcctggcagtgtatccacacgcttagcggccaccaagactgtgtccga
agctgccgattctcatgggacagccgacgcctcgcaacaggcgatgacaacggagagatc
cggctctggagtgtcaatgatggcactttgctgaagatttgttcgcgggacggtaaagac
ggaatggactcactccacggaggctgggtgaccgacctgcacttctccccagataactct
ctcctggtctccactgggggatacatcaagtggtgggatgtggagagaggtgaagctctg
cagaccttctacccctcaggatgcgctttgaagaggatccacgtgtcatccgacttctcc
accttcgtcaccatcgacaacatcggcatcctctacatcctccagagggtcgtgtga
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