Scomber scombrus (Atlantic mackerel): 134004259
Help
Entry
134004259 CDS
T10651
Name
(RefSeq) protein kinase C delta type-like
KO
K06068
novel protein kinase C delta type [EC:
2.7.11.13
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
ssco04270
Vascular smooth muscle contraction
ssco04621
NOD-like receptor signaling pathway
ssco04625
C-type lectin receptor signaling pathway
ssco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134004259
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134004259
04625 C-type lectin receptor signaling pathway
134004259
09152 Endocrine system
04912 GnRH signaling pathway
134004259
09153 Circulatory system
04270 Vascular smooth muscle contraction
134004259
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
134004259
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.13 protein kinase C
134004259
Protein kinases [BR:
ssco01001
]
Serine/threonine kinases: AGC group
PKC family [OT]
134004259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PKC_C2
PK_Tyr_Ser-Thr
C1_1
Pkinase_C
ABC1
Kinase-like
C1_2
zf-RING-like
RH_dom
PHD
FAM222A
APH
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-GeneID:
134004259
NCBI-ProteinID:
XP_062299465
LinkDB
All DBs
Position
3:9172177..9192528
Genome browser
AA seq
686 aa
AA seq
DB search
MAPFLRITFNTYDVGALPPQSDPPICAIKMKESVNTERGKTLVQRKPTMYPAWKSSFDAH
IYEGRVLEVVLMQSNEEPLAKATVGVSVLAERCKKSKTTGRVEFWMDLQPSGRVQMVVQF
FLEDNDAAASQPSVKVPPEDGFTTLTRRRGAFKQPKVHVIKNHEFCATFFGQPTFCSVCR
EFLWGLNKQGYKCRQCNAAIHKKCIEIIIGRCTGTAANSRDTVFQKERFKIDMPHRFKVY
NYKSPTFCDHCGSLLWGLYKQGLKCEDCGMNTHSYCQKKVANMCGINQKLLAEALSQVSQ
KSVKKSDPNTPDIGIYQDVQRPTADSTADSNGKPREGEGLSPTPAPRTVLKVRLTMSHLV
FLKVLGKGSFGKVLLAELKGQGQYFAVKVLKKDVVLMDDDVECTMVEKRVLSLAWENPFL
THLYSTFQSKEHLFFVMEYLNGGDLMFHIQDKGRFDLNRATFYAAEIVVGLQFLHSKGII
YRDLKLDNVMLDKDGHIKIADFGMCKENVFGEVRATTFCGTPDYIAPEILLGQKYTFSVD
WWSFGVLVYEMLIGQSPFQGDDEDELFESIRSDTPHYPRWLTKEAKNMIELLFEREPGRR
LGIVGDIRAHPFFKTINWQALERREVVPPFKPKVKSPSDCSNFDREFLSEKPRLSHADKN
LIDSMDQAAFAGFSFINPRLENMITK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcacccttcctgcgtatcaccttcaatacttatgatgtgggcgctctgcctcctcag
tctgaccctcccatatgtgccatcaagatgaaggagtctgtcaacacagagcgaggaaag
accctggtccagaggaagcccaccatgtatccagcttggaagtccagttttgatgctcac
atctatgaggggcgtgtcctagaagtggtcctcatgcaaagtaatgaggagccattggcc
aaggctacggttggcgtgtctgtactggcagaacgctgtaagaaatccaagaccactggc
cgtgtcgagttctggatggacctgcaaccttctgggagggtccagatggttgtgcagttc
ttcctggaggacaatgatgcagcggcgtcacagccatcagtgaaggttcctcctgaagat
ggattcacaactctcaccaggaggagaggagctttcaagcagcccaaagttcacgttatc
aagaaccacgagttctgcgccaccttctttggccagcccaccttctgctccgtctgcaga
gagttcctctgggggctcaacaaacaaggttacaagtgcagacaatgcaatgcggcaatc
cacaagaaatgcatcgaaataatcattggaaggtgcactggaacagcagccaacagtcga
gacactgtgttccagaaagagcgcttcaagattgatatgccgcatcgcttcaaggtctat
aactacaagagccccaccttctgtgatcactgtggtagtctgctgtggggtctctacaaa
cagggccttaaatgtgaagattgcggcatgaacacacatagttattgtcagaagaaagtg
gccaatatgtgcggaatcaaccagaaactactggcagaggctctatctcaagtcagccag
aaatctgtgaagaagtctgatccaaacacacctgatattgggatctaccaagacgtccaa
agaccaacagcagactctactgcagatagcaatggcaagcctcgtgaaggtgaaggtttg
agcccaaccccagctccacgtacagttctcaaagtacgcctcaccatgagccacctggtg
ttcctcaaagtgctgggcaaaggaagctttggcaaggtgctgttggcagaactaaaaggg
cagggtcagtactttgctgtgaaggtactgaagaaggatgtcgttctcatggatgatgac
gtggagtgtaccatggtcgagaagagagtcctgtcccttgcctgggagaaccccttcctc
acacacctctactccaccttccagtctaaagagcatctcttctttgtaatggagtacctg
aatggaggtgacttgatgttccacatccaagacaaaggccgctttgatctcaacagagcc
acattctatgctgctgagatagttgtgggactgcagttcctccactcaaaaggaattatc
tacagagatctaaagcttgacaatgtcatgctggacaaggatggacacataaagattgca
gactttggcatgtgtaaagagaacgtgtttggagaggtcagggccaccacgttttgtggg
acaccggactacatcgcaccagagatcttgttggggcaaaagtacaccttctcagtggac
tggtggtctttcggtgtgctggtgtacgagatgctgattggtcagtcacctttccaaggc
gatgatgaggacgagctctttgagtccatcagatctgacaccccccactaccctcggtgg
ctaaccaaggaggccaagaacatgattgaactgttgtttgagcgagagcccggtcgcagg
ttgggtattgtgggagacatccgtgcacatccattcttcaaaactattaactggcaagct
ctggagaggagagaagtggtcccccctttcaagccaaaagtgaaatcccccagtgactgc
agcaactttgaccgagagttcctgagcgagaaaccgcgcctctcccacgccgacaagaac
ctcatcgactccatggaccaggcagcgttcgctggcttttccttcatcaaccccagactg
gaaaacatgataaccaaatga
DBGET
integrated database retrieval system
