Scomber scombrus (Atlantic mackerel): 134004361
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Entry
134004361 CDS
T10651
Symbol
flncb
Name
(RefSeq) filamin-C
KO
K27393
filamin-C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134004361 (flncb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134004361 (flncb)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
134004361 (flncb)
Intermediate filaments
Intermediate filament-binding proteins
134004361 (flncb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
134004361
NCBI-ProteinID:
XP_062299575
LinkDB
All DBs
Position
22:23847254..23908695
Genome browser
AA seq
2772 aa
AA seq
DB search
MMNNSNYLEPQLPPQFYQNTEIGEEEEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKC
MNKRINDLQKDLSDGLKLIGLLEVLSQKKMYRKYHSRPNFRQMKLENVSVALEFLEREHI
KLVSIDSKAIVDGNLKLILGLIWTLILHYSISMPMWEDEDDEDAKKLTPKQRLLGWIQNK
VPQLPITNFHRDWRDGKALGALVDNCAPGLCPDWETWDPSQPVENAREAMQQADDWLGVP
QVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRAKTLHPKRAKAFGPGIEPRGNVV
LKPAEFLVETVEAGLGEVLVYVEDPEGHTEEARVIPNNDKNRTYSVVYLPKVEGLHKVKV
LFAGQDIDRSPFMVNISKAMGDPSRVQARGPGLQPSGNMANKPTYFDIYTAGAGAGDVGV
IIVDSNGRRDTVEIVLENKGDSIFRCTYVPVLEGPHTVYVTFAGQQIPRSPFTVHISEVS
QSVPPPGSPVQIVPQTTRTPPSDKTRRAPPPTPPKPRRPTCNPNVCRASGRGLQPKGLRV
KEVADFKVHTKGAGSGELKVTVKGPKGLEEPVKVLEMENGVFECNYYPIMTGKYTVAITW
GGHSIPRSPFEVQVSEEAGPQKVRAWGPGLETGMVGKSADFVVEAIGTEVGTLGFSIEGP
SQAKIECDDKGDGSCDVRYWPTEPGDYAVHVICDDEDIKDSPFMAHILPAANDVFPEKVK
CFGPGLEPIGCIVNKPADFTIDTQGAGRGELKLYAQDAEGFPIDIQITDNGDSTYLCVYI
PTKPIKHTIIVTWGEVNVPNSPFRVTIGEGSHPENVKVYGPGVEKTGLKANEPTYFTVDC
SEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGQYTIMVLFADQE
IPISPFRIKVDPSHDAAKVRAEGPGLNKTGVEVGKPTHFTIYTKGAGKAKPEVLFTGGAK
GEAVRDFEIIDNHDYSYTVRYTAIQQGNISITVCHGGDPIPKSPFNINVAPPLDLSKVKV
QGLNNKVDVGKDQEFTISTQGAGGQGKLDVKITSPSRRPIPCKLESGTANELHTVKYIPP
EEGAYKVEVSYDGNPVPGSPFTVEGVMPPDPSMVRAFGPGLQGGVVGKPAPFAIDTKGAG
TGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYAINILFADQHIPGSPFKAVVQS
AFDPSKVTASGPGLERGKVNEAGSFTVDCSKAGEAELTIEILSESGSKAEVLIQNNSDGT
YSITYIPPLHGMYTITIKYGGHAVPKFPARLQVEPAVDTSGVKVYGPGVEPRGVLREVTT
HFIVDARAHCKSGGSHVKSSVANPSGANTDTFITDKADGTYRVEYTPYEDGLHLIEVLYD
EVAVPKSPFKVSVTEGCDPSRVRAYGPGLEEGLVNKPNRFTVETRGAGTGGLGLAIEGPS
EAKMSCKDNKDGSCSVEYIPFTSGEYDVNITFGGLPIPGSPFRVPVRELVDPSKVKCSGP
GLGSGVRANVPQTFTVDSSKAGVAPLEVQLYGPSGVAEPVSITDNGDGTHTVNYTPANDG
PYTVCVKYADQEVPRSPFKIKTLPAHDASKVRASGPGLNASGVPASLPVEFTIDARDAGE
GLLTVQILDPEGKPKKANIRDNRDGTYTVSYVPDMTGRYTITIKYGGDEIPYSPYRIHAM
PTGDASKCLVTVSIGGHGLGSGIGPTIQIGEETVITVDAKAAGKGKVTCKVSTPDGAELD
VDVVENADGTFDIYYTAPEPGKYVITIRFGGEQIPNSPFHVVATDTVPIIEEPCDKLQLQ
QPYSPYVGFSPHWATDDPISPVDGMEPVLRPFSLVIPFTVQKGEITGEVRMPSGRTACPH
ITDNKDGTVTVKYSPTERGLHEMDIKYDGNHIPGSPLQFYVDAINSGHVTAYGPGLSHGT
VNRPAIFTIVTKDAGEGGLSLAVEGPSKAEISCKDNKDGTCTVSYMPTAPGDYNIIVKFD
DKHIPGSPFTAKITGDDSMRTSQLNVGTATDVSLKITETDLSSLTATIRAPSGNEEPCLL
KRLPNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGQSEIGDASKVKVYGQGLVE
GHTFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDVEDGTCKVTYCPTEPGNYIINIK
FADQHVPGSPFTVKVFGEGRMKESITRKRQAPSIATVGSTCDLNLKIPGNWFQMVSAQER
LTRTFTRSSHTYTRTERTEISKTRAGETKREVRVEESTQVGGDPFRDMFGDFLGRECLGG
FSGSRPPLQEGETGNQEMTAQVTSPGGKTDDAEIIRGEDSTYSVRFIPQEMGPHIVNVKY
RGQHVPGSPFQFTVGPLGEGGAHKVRAGGTGLDRGVAGIPAEFSIWTREAGAGGLSIAVE
GPSKAEITFEDRKDGSCGVAYVVQEPGDYEVSIKFNDEHIPDSPFIVPIATLSDDARRLT
ITSLQEMGLKVGQEASFAVQLNGARGLVDAKIHTPSGAIEECYITELDSDQHAIRFIPRE
NGVHSIDVRFNGSHVPGSPFKIRVGEPGQVGDPGMVSAFGPGLEGGTTGVASEFIVNTCN
AGAGALSVTIDGPSKVKMDCQDCTDGYKVSYTPMAPGNYLISIKYGGPQHIVGSPFKAKV
TGPRLSGGHSLHETSSVLVETVTKSSAMGGAFASLPKFSSDASKVISRGAGLSKAFVGQK
NTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRMYNVTYTVKEQGSYILIVKWGDE
NVPGSPFHVTVP
NT seq
8319 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaacagcaactacttggagccgcagctgccgccgcagttctaccagaacacc
gagatcggcgaggaggaggaggagatgccggccaccgagaaggacctggccgaggacgct
ccatggaagaagatccagcagaacaccttcaccaggtggtgcaacgagcacctaaagtgc
atgaacaaacggatcaacgacctgcagaaggacctgagcgacgggctgaagctgatcggg
ctgctggaggtgctgagccagaagaagatgtacaggaagtatcactccaggcccaacttc
agacagatgaagctggagaacgtttccgtggctctggagttcctggaaagagaacacatc
aagctggtttccatcgactctaaagccattgtggacgggaacctgaagctgatcctgggt
ctgatctggaccctgatcctgcactactccatctccatgcccatgtgggaggacgaggac
gacgaagacgccaagaagctgacgcccaaacagcgtctgctgggctggatccagaacaag
gtgccacagctgcccatcaccaacttccaccgagactggagggacggcaaggcgctggga
gctctggtggacaactgcgctccaggtctctgtccagactgggaaacgtgggatcccagt
cagccggtggagaatgcccgagaggccatgcagcaggctgatgattggctcggagtgccg
caggttatcgctccagaggagatagtcgaccccaacgtggacgagcactcagtgatgacg
tacctgtctcagttccccaaagccaagctgaagcccggcgcccccctcagggcgaagacg
ctgcacccaaagagagccaaagccttcggaccgggtattgaacctcgaggtaacgtcgtc
ctgaagccggcagagttcctggtggagacggtggaggccggactgggcgaggttctggtt
tacgtggaggatccagagggacacacagaggaggcccgagtgatccccaacaacgacaag
aacagaacctactcagtggtctacctgcccaaagtggaggggcttcataaagtgaaggtg
ctgtttgctggtcaggacatcgacagaagtcccttcatggtgaacatctcgaaggccatg
ggcgacccgagcagagttcaggcccgcgggccgggactgcagccgtcaggaaacatggcc
aacaagcccacatactttgatatttacaccgcaggggcgggcgctggagacgtgggcgtc
atcatcgtggactcaaacggccgcagagacacagtggagattgtcctggagaacaaaggc
gacagtatcttccgctgcacctatgttcccgtcctggaggggcctcacacagtttacgtg
acctttgctgggcagcagattcccagaagccctttcactgtccacatctccgaggtttca
cagagcgtccctcctcccgggtctccggtgcagattgtacctcagaccacacgcaccccg
ccctcagacaagaccaggagagccccccctccaactccgcccaaacccaggcgaccaacc
tgcaaccccaacgtttgcagagcgtcggggagaggtctgcagccgaagggtctgagggtg
aaagaagtggctgattttaaagttcacacaaaaggagccggcagcggagagctcaaagtg
accgtgaagggaccaaaaggcctggaggagccagtgaaggtgcttgagatggagaatggc
gtgtttgagtgtaactattacccgataatgacggggaaatacaccgtcgccatcacctgg
ggaggacacagcatcccacgcagcccgtttgaggtgcaggtgagcgaggaggcgggacct
cagaaggtgagggcgtggggtccaggtctggagacggggatggtggggaagagcgctgac
tttgtagtggaggccatcgggacggaggtggggacactcggtttctccatcgagggtccg
tcacaggctaagatcgagtgtgatgataaaggtgacgggtcatgtgatgtgaggtactgg
ccgactgaaccgggcgactacgctgtccacgtcatatgtgatgacgaggacatcaaggac
agtccattcatggctcacatcctccctgctgccaacgacgtcttcccagagaaggtgaag
tgtttcggtcccggtctggagccgatcggctgcatcgttaacaaacctgctgatttcacc
atcgatacccagggagccggcagaggagagctgaagctctacgctcaggatgcagaaggc
ttccccatcgacattcagatcacagataacggagacagcacctacttatgtgtttacatt
cccacaaaacccattaaacacaccatcatcgtcacctggggggaagtcaacgtccccaac
agcccattcagggtgaccatcggtgagggcagccatccagagaacgtgaaggtttacggt
cccggtgtggagaagacgggactgaaggccaacgagccgacgtacttcaccgtggactgc
agcgaggccggacagggtgatgtcagcatcgggatcaagtgtgctccaggtgtggtcgga
cctgcggaggccgacatcgactttgacatcattaaaaacgacaacgacacgttcacggtg
aagtacacgcctcctggcgccgggcagtacaccatcatggtgctgttcgctgatcaggaa
atccccatcagccccttcagaataaaagtggatccttctcatgatgcagctaaagttcga
gctgagggacccggactcaacaagacaggtgttgaggttggtaaaccgactcacttcacc
atctacacgaagggagccggtaaagccaaacctgaagtcctcttcaccggaggagcgaaa
ggagaagccgtccgagacttcgagatcatcgacaaccacgactactcgtacaccgtccgc
tacaccgccatccagcagggaaacatttccatcaccgtgtgtcatggaggagaccccatc
cctaaaagtcccttcaacatcaatgtggccccaccactggacctcagtaaggtcaaagtt
cagggactcaacaacaaggtggatgttgggaaggaccaggagttcaccatcagtactcag
ggcgccggaggtcagggcaaactggatgtgaagatcacgtctccgtcacgtcgaccaatc
ccctgcaagctggagtcgggcacagccaatgagctgcacacagtgaagtacatccccccc
gaggagggagcctacaaggtggaagtcagctacgacggaaaccccgtcccaggaagtccg
ttcactgtggagggcgtcatgcccccggacccttctatggtgcgagccttcggtccaggt
ctacagggaggtgtggttggtaaaccggccccctttgccattgacacaaagggagcaggg
accggtggtttgggtctgaccgtggagggtccctgcgaggccaagatcgagtgccaggat
aacggagacgggtcctgctccgtgtcctacctccccactgagcccggcgagtacgccatc
aacattctgtttgcggaccagcacatcccaggttcccccttcaaggcagtagtgcagtca
gcgttcgaccccagcaaggtgacggccagcggtcccggtctggagcggggcaaggtcaac
gaggccgggtccttcacggtggactgctctaaagccggagaggccgagctcaccatcgag
atcctttctgagtccggatccaaagctgaagtcctcatccagaacaacagcgacgggact
tattccatcacctacatcccgccgctgcacggcatgtacaccatcaccattaagtacggc
ggccacgcagtgcccaagttccccgcccgcctgcaggtggaaccagctgttgataccagc
ggggtcaaagtctacggaccaggagtggaacccagaggagtcctgagagaagtcaccaca
catttcatcgtggatgctcgagctcactgcaagagcggcggcagtcacgtcaaatcgagt
gtcgccaatccgtcgggcgccaacacggacaccttcatcacggacaaggccgacgggacc
tacagagtggagtacacgccgtatgaggacggtttgcatctgattgaagtgttgtacgat
gaggttgcggtgccgaagagtccgttcaaggtgtcggtgactgaaggttgtgatcccagt
cgagttcgagcttatggtccaggtctggaggaaggactggtcaacaaaccgaaccgtttc
actgttgagaccaggggtgctggcaccgggggtcttggcctagccattgagggtccatca
gaggcgaagatgtcctgtaaggacaacaaagatggcagctgcagtgtggagtacataccc
ttcacctctggagagtatgacgtcaacatcacctttggaggcctcccgatcccaggaagt
ccgtttcgggtcccagtgcgagaactggtggatcccagtaaagtgaagtgttcaggtccc
ggcttgggaagtggagtccgagctaatgtccctcagaccttcactgtggacagcagcaag
gctggcgtggcccctctggaggtccagctctatggcccctcaggtgtggccgagcccgtc
agcatcactgacaatggtgacggtactcacacggtcaactacactcctgccaatgacggc
ccgtacacggtgtgtgtgaagtacgccgaccaggaggttcctcgcagtccatttaagatt
aagacgttgccagctcacgatgccagtaaggttcgagccagcggtccaggtctgaatgcg
tctggagttccagccagtctgccggtggagttcaccatcgatgctagagacgcaggagag
ggactgctcactgtccagatactggatcctgaaggaaaaccaaagaaggcgaacatccgg
gacaaccgggacgggacgtacacagtgtcctacgttcccgacatgacgggacgttacacc
atcaccatcaagtacggaggagacgagatcccgtactcgccctaccgcatccacgccatg
cccaccggagacgccagcaagtgtctcgtcacagtatcgatcggaggacacggactggga
tcagggatcggtccgaccatccagatcggagaggagacagtaatcactgttgatgcaaag
gctgctgggaaaggtaaagtcacctgcaaggtgtcgacccctgacggagcggagctggac
gtggacgtggtggagaatgccgatggcacgtttgatatttactacacggctccagagccg
gggaagtacgtcatcaccatccggtttggaggggaacaaattcccaacagcccgttccac
gtggtggccactgataccgtcccaataatagaggaaccatgtgacaagcttcagttacag
cagccgtactctccctatgtgggcttctcccctcactgggccactgatgatcccatcagc
cccgtggatgggatggagcccgtgcttcgccctttcagtctggtcattcccttcaccgtg
cagaaaggagagatcacaggtgaggtgcgaatgccctccggtcgaaccgcctgtcctcac
atcaccgacaacaaggacggcaccgtgaccgtcaaatactcaccaactgagcgaggtctg
catgagatggacatcaaatacgatggcaaccatatcccaggaagtcctctccagttctac
gttgatgccattaacagtggtcatgtgacggcatacggtcccggtctgagccacggcacg
gtgaacagaccggccattttcactatcgtcactaaagacgctggagaaggcggtctgtct
ctggctgtggaaggtccctctaaagcagagatcagctgtaaggacaacaaagacgggacg
tgcaccgtgtcctacatgcccaccgcacctggagactacaacatcatcgtcaagtttgat
gacaaacacatccccggaagcccgttcaccgccaagatcaccggtgacgactccatgagg
acgtcccagctgaacgtcggcacggcaacagatgtttccttaaagatcacagagacggac
ctgagcagcctgacggcgaccatcagagcgccgtctggcaacgaggagccgtgcctgctg
aagaggcttcccaacagacacattgggatctcgttcacgccaaaggaagttggcgaacat
gtggtgagtgtgaagaagaacgggaagcacgtgactaacagcccgtttaagatcatggtg
ggtcagtcggagatcggagacgccagcaaggtgaaggtgtacggtcagggcctggtcgag
ggacacaccttcgaggttgccgagttcatcgtggacaccaggaacgcaggttacggaggt
ctgggtctgtccatcgagggtcccagtaaagtggatattaactgtgaggacgtggaggac
gggacgtgtaaagtcacgtactgtcccactgaacctggaaactacatcattaacatcaag
tttgctgaccaacacgtaccaggaagtccgttcacggtgaaggtgtttggcgagggcagg
atgaaggagagcatcaccaggaagcgtcaggctccctccatcgccaccgtgggaagcacc
tgcgacctcaacctcaagataccagggaactggtttcagatggtgtctgctcaggagcgt
ctgacacggacgttcacgcgcagcagccatacgtacacacgcaccgagcggacggagatc
agtaagactcgagctggagagacgaagcgggaggtcagagtggaggagagcacgcaggtc
ggaggagacccctttagagacatgttcggagacttcctgggacgagagtgtctgggaggg
ttcagcggcagccgaccgccactgcaggagggtgagacaggaaaccaggagatgacagct
caggtgacgagtcccggcgggaagacggatgacgccgagatcatcagaggagaggacagc
acctacagcgtccgcttcattcctcaggagatgggacctcatatcgtgaacgttaaatac
cggggccagcacgttcccgggagcccgttccaattcaccgtggggcccctgggagaagga
ggggcccacaaggtccgagcaggaggcaccggtctggaccgaggagtggcagggatccca
gctgagttcagtatctggaccagagaagccggcgctggaggtctgtccatcgctgtggaa
ggacccagcaaggccgagatcacctttgaagacaggaaagatggatcctgtggagtcgcc
tacgtggttcaggagcctggtgattatgaggtctccattaaatttaacgacgagcacatc
cctgactctcccttcattgtccccatcgccacactgtctgatgatgctcgccgtctcacc
ataaccagcctgcaggagatgggtctgaaggtggggcaggaggcttcctttgctgtgcag
ctaaatggagccagagggctggttgatgccaaaatccacacaccatcaggagccatagaa
gagtgttacatcaccgagctggacagcgatcagcatgctatcaggttcatcccaagggag
aacggagttcattccatcgacgttcgtttcaacggcagccatgtgcctggcagccccttc
aagattcgagtgggagaaccgggacaagtgggagatcctggcatggtgtctgcctttgga
ccaggactggagggaggaactactggcgttgcgtcagagtttattgtgaacacatgcaat
gccggcgcaggagctctgtccgttaccatcgacggaccatcaaaagtaaagatggactgt
caggattgcactgatggctacaaggtctcctacacacccatggctcccggaaactacctg
atctccatcaagtatggaggaccccagcacatcgtaggcagccctttcaaagccaaagtc
acaggtcctcgtctgtccggcggccacagtctgcacgagacgtcgtcggttctcgtggaa
accgtcaccaagtcatcagcgatgggcggggccttcgcctctttgcccaaattctcttca
gatgctagtaaagtcatctccaggggcgctggcctatcaaaagcctttgtgggccagaag
aacacatttacagtcgactgcagcaaagcaggcaccaacatgttgatggtgggcgtccac
gggccaaagacgccatgcgaagaagtgtacgtcaaacacatgggcaacaggatgtacaac
gtcacgtacacagtcaaagagcagggcagctacatcctcatcgtgaagtggggggacgag
aatgtccccggcagtcccttccacgtcactgtcccttaa
DBGET
integrated database retrieval system
