Scomber scombrus (Atlantic mackerel): 134004469
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Entry
134004469 CDS
T10651
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134004469 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134004469 (lemd3)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
134004469 (lemd3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
134004469
NCBI-ProteinID:
XP_062299742
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Position
22:273166..296610
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AA seq
860 aa
AA seq
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MASTQLTDEELFSELKRFGFTPGPVTENTRPVYLKKLKKLREEQQQRGFRSGKTRSSGTI
NSTTGGGNTAGSRPASHDVTHLNTSRRPGRKSSVLGFSSDESDAETPQRRKGLNYRGRAD
QSPGFQQQPKIRPVITPGVAIKNQRGAGTTLNSNNSSPSPDGHRSVSLGWGVRARSSPEA
EGRNCDDSRDEDDYEGGKEKISRSLNGSRAPQLNTSKLAGDYSDEEEVGGLGIGDRQRDR
LELRRSYPKAVFSSHIVIRGSPTVGATGVINSPGSVNMVGNRRDEKEEEDEVQRIDSDRS
GGMLRHNFPRKSIYVSLTDNHGGESDRNNHVDDEDGVSRSSNTSRFSSGLRPRFSNYSSS
SQTYRGNHSNHTAPNHSYRQAVLKQKLSLPEDELLQQFKREEAASSGSFSAHYLSMFLLT
AACLFFLLLGLMYIRMRGSGSTEVDGVIKSHPFGTEFDSSYNKTEKDLILKLLLSLHDHL
AHIAGQYDCGDQQHPNRSLAIEEASVYLQAQNQEFDKFIHTSLEWIIRTGQDVGIRLTGQ
VADDPVTDVSEISRLESTHPKMPFTCRFRRAFLTVISRVFLIAAVVGCVWGVVFYMKRRW
RREEEETRQMYDMVERIIDVLRSHSEACQENQDLQPYLPIPHVRDSLVQPQDRKKMKMIW
ERAVNFLSANESRIQTENQRIGGGDFLVWRWIQPSLSCDKTSLIPSKVWQGKAFPLDRRN
SPPNSLTPCLKIRNMFDPVMEVGENWDLAIHEAILEKCSDNDGIVHIAVDKNSREGCVYV
KCLSAEHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQAQGCSTPLKASSLHFNTTS
TTNTTPHLQYHGSANSSGFS
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacgcagttaacggatgaggagcttttctccgaattaaagcgctttggtttc
actccaggccctgttaccgaaaacactcgaccggtatatttgaagaaattgaagaagcta
cgcgaggagcaacagcaacgtggatttagatctggtaaaacccgtagcagcgggaccatt
aacagtaccactggcggcggcaacacggcgggatcaaggccagccagccatgacgtcacg
cacctgaacaccagcagaagaccgggccggaagtcctccgtcctcggcttcagctccgac
gagtctgacgctgaaactccacagagaagaaaaggcctcaattatagaggcagggcagac
caaagccccggttttcaacaacaaccgaagatacgacccgttataacacccggcgtggct
attaagaatcagcgtggcgcagggactacgctaaatagcaacaattcttccccgagtccg
gacggacatagaagtgtctcgctgggttggggagttcgtgccagatccagccctgaggcg
gaaggaaggaattgcgacgactcaagggacgaggacgattatgaggggggaaaagagaaa
atatctcggtctttaaatggtagcagagcgcctcaattgaacactagcaagctagctggg
gattactcggacgaggaggaggttgggggccttggtattggagaccgacagcgggatagg
ttggagctgagacggagttatccgaaagcggtgttttcatcccacatagttatccgaggg
tctccaacggtaggagcaaccggagtgattaactcacccggtagtgtaaacatggtgggt
aatcggagggatgagaaggaggaggaagacgaggtacagagaattgattcggaccgatcg
ggaggcatgttgagacacaactttcccaggaagtccatctacgtgtccctcaccgataac
cacggaggagagtccgacagaaacaaccacgtcgacgacgaggacggagtatccagaagc
agcaacactagtaggttcagcagtgggttgaggccgcgcttttccaactacagcagttca
tcccagacctacaggggcaaccactccaatcacactgctcccaaccactcatacagacag
gcagtgctgaagcagaagctgtctctcccagaggatgagctgctccagcagtttaaacgg
gaagaggcggcctcctctggcagcttcagcgctcattacctgtccatgttcctgctcacc
gcagcctgcctcttctttctgctgctgggtctcatgtacattaggatgaggggatctgga
tccacggaggtggatggagttattaagagccacccttttggcaccgagtttgactcttct
tataacaagactgagaaggacctgatcttgaagctgctgctcagtctacacgaccacttg
gcccacattgctggccagtatgactgcggagaccagcagcatccaaacaggagtctggcc
atagaagaggcctctgtgtatttacaggctcagaatcaggagtttgacaaattcattcat
acttctctggagtggatcatccggacaggccaggatgttgggataaggcttactgggcag
gtagctgatgatcccgtgactgatgtgtctgagatttctcggctggagtccacacatccc
aagatgcccttcacatgccgcttccgccgtgccttcctcactgtaatcagcagagtcttc
ctcatcgcagctgtggtaggctgtgtgtggggtgtagtcttctacatgaagcgtcgctgg
aggagagaggaagaggagacgaggcagatgtatgacatggtggaaaggatcatcgatgtg
ttgaggagccacagtgaggcttgccaagagaaccaggacctgcagccctacctgccgatc
ccccatgtcagggactccctggtacagcctcaggaccggaagaaaatgaagatgatttgg
gagagggctgtgaacttcctgtcggccaacgagtctagaattcaaacagagaatcagagg
attggtggaggagacttccttgtctggaggtggatccagccttctctcagttgtgacaag
acctccctgatcccctccaaagtctggcagggaaaagctttccctctggaccgtaggaat
tcacctcccaacagcctgacaccatgtctgaagatcaggaacatgttcgacccagtcatg
gaggttggggagaattgggacctagccatccatgaggcaatcctagagaagtgcagtgac
aacgacggcattgtccatattgctgttgacaagaattcgcgagagggctgtgtttatgtc
aagtgtctctctgcagagcactcagggaaagccttcaaggcacttcatggctcctggttt
gatggtaagctggtgacagtgaagtatctgcgtttggaccggtaccaccagcgcttccca
caggcccagggctgcagcacacccctgaaggcctccagcctccacttcaataccaccagc
accacaaacactacgccccacctgcagtaccatggctcagccaactcctctggcttctca
tga
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