Scomber scombrus (Atlantic mackerel): 134006165
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Entry
134006165 CDS
T10651
Name
(RefSeq) toll-like receptor 2
KO
K10159
toll-like receptor 2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
ssco04620
Toll-like receptor signaling pathway
ssco05132
Salmonella infection
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134006165
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134006165
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134006165
09171 Infectious disease: bacterial
05132 Salmonella infection
134006165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134006165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134006165
04054 Pattern recognition receptors [BR:
ssco04054
]
134006165
04090 CD molecules [BR:
ssco04090
]
134006165
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
134006165
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Toll-like receptors
134006165
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of breast milk
134006165
Pattern recognition receptors [BR:
ssco04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
134006165
CD molecules [BR:
ssco04090
]
Proteins
134006165
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Hyaluronan
Cell surface receptors
134006165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
TIR_2
LRR_9
LRR_5
LRR_LRWD1
LRR_Zer-1
HemY_N
Motif
Other DBs
NCBI-GeneID:
134006165
NCBI-ProteinID:
XP_062301242
LinkDB
All DBs
Position
23:complement(1558493..1569245)
Genome browser
AA seq
817 aa
AA seq
DB search
MTHPSVFYLLLLLLFSSLCWGQRSDSEKPSCNRCDLQLSCNCSYGGFIAVPVVTGLALTL
DLSFNNITVVTDDDLTGHKPLRALSLHGNRLAVIHPSAFKSLWRLEKLDLSNNQLTSLNH
TWFSKLEALQQLNLLNNPYSCLGPPPVFQGLVRLKKLAFGGPALKELRRGDLSGVTQLEE
LTVHANNLTRYESGALAYIWPLGRVTLSLHNPFLTNQTLASSVLNDISYPETQMVFEDIH
LIYHDSAEPFEVISRRRVRHLTFHNFSASDEAIVNFLNKTNGAPISSLFFDVVTLTGEGR
WERAKWTDHKSVDVFYLRDAVVLNVFQFVSFFNLKYLLQYPRKVSVINCGVFVMPCNTSR
LLMNMQYLDMSDNLLTDMTLEETLCNGDGSMKDLRVLNVSRNALKSLSLVSRLVTKLSKL
THLDISRNIYTSMPQGCTWPSTLRYLNISRVKLRTVTLCLPKTLEVLDLSNNDLKDFTLF
LPALRELHLSGNKFLKLPHGLLFPNLQSLTIQSNTLNMFSRLDLQSYKQLQNLQAGQNKF
VCSCDFVAFLQSDIKGAGDVHLTDGMENYVCDAPFHLQGKIVSQVHLTILDCHRVLFVSV
SCGVALFVGVLMSVVLWRLHAFWYLKMTWSWLKAKRSSRQRRRDQADSEALLCFDAFVSY
SEKDARWVENFLVPELEETRENNDDAMNPRNSQPLSLCLHKRDFIPGHWIVDNIMSAMER
SRRTVFILSENFVRSDWCRYELDFSHFRLFDGTAGGNAAILILLEPLAKDDIPRRFYKLR
RLMNSTTYLEWPLEEERRPEFWKRLRDALGGEEEEDN
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgacacacccgtctgtcttttacctcctcctcctcctcctcttctcgtccctctgctgg
ggtcagaggtcagacagcgagaagccctcctgtaatcgctgtgacctgcagctctcctgt
aactgctcctatggtggattcatcgctgttcccgtggtaacaggcctcgccctgactctt
gatctctccttcaacaacatcaccgtggtgacggatgacgacctgacgggccacaagcca
ctgagagcgctgagtctccatggtaacagactagctgtgatccatccatcagcatttaag
tctctgtggaggctggagaagctggatctgtccaacaatcagctgacgtctcttaatcac
acctggttcagcaagctagaagctctgcaacagctcaacctgctcaacaacccgtacagc
tgcctgggtcctccgccggtgtttcaggggctggtcaggctgaagaagctggcgtttgga
ggtcctgctctgaaggagctcaggagaggagatctgtctggagtcactcagctggaggag
ctcactgtgcacgccaacaacctgaccaggtatgagtccggtgctctagcgtatatttgg
ccattgggtcgtgtaactttgagcctccacaatccatttttaactaaccaaactttggcc
tcgtctgtgctcaatgacatatcgtaccctgagacacaaatggtttttgaggacatccat
ctgatttatcatgactctgctgagcccttcgaagtgatatccagaaggagagtcaggcac
ttgaccttccataacttctctgcatccgatgaggccattgtcaacttcctgaacaaaaca
aatggagcgccgatcagttctcttttctttgatgttgtcacactaacgggggaaggaagg
tgggagagagccaaatggactgatcacaaaagtgtcgatgtgttctacttacgagatgcc
gtggtgctgaatgtctttcagtttgtctcattttttaacctaaagtacctgctgcagtac
cccaggaaggtgtccgtcataaactgcggggtgtttgtgatgccctgtaacacatctcgc
ctgctgatgaacatgcagtacctggacatgtctgacaacctgctgaccgacatgactctg
gaggagacactgtgcaacggagacggctctatgaaggacctccgagttttaaacgtcagc
agaaatgctctgaagtctttgtccttagtgagccgactggtaacgaaactctccaaactg
acccacctggatatcagcaggaatatctacacctccatgccacagggctgcacctggcca
tctaccctgcgatacctcaacatctccagggtcaaactgcgcactgtcaccctctgtcta
cccaaaactctggaggtgctggatctgagcaacaatgatctcaaagacttcactctgttc
ctgcccgccctgagagagctccacctctctgggaacaagtttctgaagctgccccatgga
ttgttgttccccaatctgcaatcactaactatacagtctaacaccctgaacatgttcagc
cgcttagaccttcagtcatataagcaactgcagaacctccaggcgggtcagaacaagttt
gtctgctcctgtgactttgtggctttcctccagtcggacatcaaaggagctggagatgtg
catttaacagatggaatggagaactacgtgtgcgacgctcctttccacctgcaggggaaa
atagtgagtcaagtccacctcactattctcgactgccatcgggttttgtttgtgtccgtg
agctgtggggtggcgctgtttgttggagttctgatgagtgtcgtgctgtggcgcctccac
gcattttggtacctgaagatgacgtggtcgtggctgaaggccaagcggagctcccgacag
agacgcagagatcaagcagattcagaggcgttgttatgcttcgatgcctttgtttcatac
agtgagaaagacgcaagatgggtggaaaacttcttggtaccggagctggaggaaacaagg
gagaataatgacgatgctatgaaccccagaaactcccaacctctgtccctgtgcctccac
aaaagagacttcatccctggacactggattgtggacaacatcatgagtgccatggagcgc
agccggcggaccgtatttatcctctccgagaacttcgtccgctctgattggtgccgctac
gaattggatttctcccattttcggcttttcgatgggactgccggcgggaatgcagccatc
ttgatcttgctggaaccgctggccaaagacgacatcccgagacgtttctacaaattgcgc
aggctcatgaactccaccacctacctggagtggcctctggaggaggagaggaggccggag
ttctggaaaagactccgtgatgctttgggaggagaagaagaggaggataactga
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