Scomber scombrus (Atlantic mackerel): 134006629
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Entry
134006629 CDS
T10651
Name
(RefSeq) radixin-like
KO
K05762
radixin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04517
IgSF CAM signaling
ssco04530
Tight junction
ssco04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
134006629
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134006629
09142 Cell motility
04810 Regulation of actin cytoskeleton
134006629
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
134006629
04147 Exosome [BR:
ssco04147
]
134006629
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Ezrin/Radixin/Moesin
134006629
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
134006629
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERM_C
FERM_M
ERM_helical
FERM_C
FERM_N
Motif
Other DBs
NCBI-GeneID:
134006629
NCBI-ProteinID:
XP_062301549
LinkDB
All DBs
Position
24:8498010..8518387
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AA seq
579 aa
AA seq
DB search
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYITWLK
LNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEALLNDENYCPPE
TAVLLASYAVQAKYGDYGKDVHKPGYLTHDRLLPQRVLEQHKLTKEQWEDRIQTWHEEHR
GMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTQLWLGVDALGLNIYEHEDKLTPKIGF
PWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTI
EVQQMKAQAREEKHHKQMERAQLENEKKKREHAEKEKERIEREKEELMERLRQIEEQTMR
AQKELEEQTRRALELEQERKRAREEAERLERERKAAEEAKAELAKQAEDQQKNQEQLASE
LAEFTAKIVLLEEAKKKKDEEATEWQSKALSAQEDLEKTKEELKTAVTVVPAPPGGNAEH
DEQDENHAEASAELSNEGVSQLDLRSEEERVTEAQKNERVKKQLQTLSSELAEARDETKK
TQNDVLHAENVKAGRDKYKTLRQIRSGNTKQRIDEFESM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccgatcaatgtccgtgtgactaccatggatgcagagctggagtttgccatc
cagccgaacactacaggaaaacagctctttgatcaggtggtgaagacggtgggactgcgg
gaggtttggttctttggcctacagtatgtggacagtaagggctacatcacatggctcaaa
ctcaataagaaggtgacccagcaggatgtgaagaaagagaaccctctgcagttcaagttc
agagccaagttcttccctgaggatgtctcagaggagctaatccaagagatcacccagaga
ctcttcttcctgcaggtgaaggaggccctcctaaacgatgagaactactgtcccccagag
acagctgtgttactggcgtcatacgctgtccaggccaagtatggagactatggcaaagat
gtgcacaagcctgggtacctcacccatgacagactgctgcctcagagagtcctggagcag
cacaagctgaccaaggagcagtgggaggacaggatacagacttggcatgaagaacacaga
ggaatgctcagagaggactcaatgatggagtatcttaaaatcgcccaggacttggagatg
tacggagtcaactactttgagatcaaaaacaagaagggaacacagctgtggctgggtgtg
gacgcccttggccttaacatctatgaacacgaagacaagttgacaccaaagatcggcttc
ccctggagtgagattcgaaacatctctttcaatgacaagaagtttgtcatcaagcctatt
gacaagaaagcacccgactttgtgttttatgccccaagactgcgcatcaacaagcggatc
ttggcgttgtgtatgggtaaccatgagttgtacatgaggaggagaaagcccgatactatc
gaggtgcagcaaatgaaggctcaggcccgggaggagaagcaccacaaacaaatggagagg
gcccagctggaaaatgagaagaagaagcgagagcatgcggagaaagagaaggagaggata
gagcgcgagaaagaagagctcatggagaggctgagacagattgaagaacagacaatgcga
gcccagaaagagctcgaggaacagactcgccgggccttggagttagagcaggagagaaag
agagcgagggaggaggcagagaggctggagagagaaaggaaagcagctgaggaggccaag
gctgagctggcaaaacaggccgaagaccagcagaagaaccaggaacagctggcttctgaa
ctggctgaattcacagcaaagatcgttctcctggaagaagccaagaaaaagaaagatgag
gaggccacagaatggcagtctaaggctctgtcagcgcaggaggacctagagaagaccaag
gaggagctgaagaccgcggtaacagtggtgccagctcctccgggcggcaatgctgagcat
gacgagcaggatgagaaccatgcagaggccagcgctgagctctccaatgagggcgtcagc
cagctagatcttcgcagcgaggaggaacgcgtcaccgaagctcagaagaatgagcgggtg
aagaaacagctgcagacgttaagttcagagttggccgaggccagagatgaaaccaagaag
acacagaacgatgtcctacacgccgagaacgtgaaagcaggccgagacaaatacaaaacg
ctgcgtcagatccgatcgggcaacacgaagcagcgcatcgatgagtttgagtccatgtga
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