Syngnathus scovelli (Gulf pipefish): 125966670
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Entry
125966670 CDS
T08785
Symbol
adamts18
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125966670 (adamts18)
Peptidases and inhibitors [BR:
sscv01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
125966670 (adamts18)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
TSP1_spondin
PLAC
Reprolysin_5
Reprolysin_2
ADAMTS_CR_3
Reprolysin_3
TSP1_CCN
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
125966670
NCBI-ProteinID:
XP_049573004
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All DBs
Position
4:complement(21210048..21239278)
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AA seq
1251 aa
AA seq
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MDCLLLIIWTLPLPLVGCAPVRLLSTLLTWSLIKTLHICCTHASLHSVSTNYFSSSSSSS
SSSHGLNHDYAFATPVEVDAQGQYLSHDVSRRSRRSRRSVSQSSSVHYRLSVFGRDLHLD
LRPSSVVGPGFTVQTLGSDGIATVTRGDGYHDCFYQGSIRDLSSSSAAISTCSGLSGLIR
VSEHDYLISPLPQHLANRHNYSAPDGHHPHVVYKRSAEHVVRQQAGDLSGFEPSTWHRDH
HQQPDDQNGHSERQHFCGRRKQYTPKPPVEEPFLMPDEFATTDEEGPGRPKRSPIDSNRV
GGLNVETLVVADRKMLEKHGRENVTTYVLTVMNMVSSLFKDGTIGTDINIVVVSLLLLEQ
DPLGLSINHHADQSLNSFCQWQSGLVGKSGKRHDHAVLLTGLDICSWKNEPCDTLGFAPI
SGMCSKYRSCTINEDTGLGLAFTIAHESGHNFGMVHDGEGNPCRKTEGNIMSPTLAGNNG
VFSWSICSRQYLNRFLGTTQASCLVDEPKQIGQYKYPEKLPGQLYDADTQCKWQFGAKAT
LCSLDFVKDICKSLWCHRTGQRCETKFMPAAEGTSCGPDMWCWRGQCVKYGEHGPKAVHG
QWSPWSQWSECSRTCGGGVMYRERSCTSPRPQHNGKFCYGPGRHNQLCNTRACSHNSVDF
RTQQCAEHNSKPFRGWYYKWKPYTKVDDEDVCKLYCTAESFDFFFAMSSKVKDGTSCSDH
RGDVCIDGVCETVGCDQILGSKASLDACGVCKGSNSTCKFYKGMYTLQHRANEYYSMVTI
PAGARSIRVEEMAVSTSYLAVRSIKRKYYLTGDWTVDWPGKFHFGGATFSYQRSFSKPES
LYAAGPTNETLVFEILLQGKNPGVVWEYTLPRTERKPDYSWGVVRSDCSAPCAGGRISTK
AICLQDQKVHVNATMCNPLTRPTLGSHLCNTQPCPAYWWTGEWAVCSRSCGGGQQSRTLR
CMRKVTYQREEAAAHSLCPVVSPAQLRPCNTQACPPGWNAGAWSQCSKSCGRGLRKRSVF
CQSGDAGLAAVVPDSMCRHNERPKAQESCVLRRCPKNDRLQWTPTSWGECSRSCGPGLQK
RELRCGEKDFQGGFVEFPARRCRNLAKPLADLQQVCDRGPCPELARVPQGRTVPGAAVSS
WYSSPWQQCSVSCGGGVQTRGVQCLLQGRAASGCLAHQRPVATRACNTQFCPRAAPLPHH
HNRVTAVGTTIRGEPPCVDRFSWCHLVPQHGVCGHKFYGDQCCRSCTGRRL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggactgtctgcttcttatcatttggactctacccttgccgctggtcggctgcgcccca
gtgcggctgctctctaccctgctgacctggagcctcatcaagacattgcacatttgctgc
acgcacgcctccctgcacagtgtgtcaaccaactacttttcttcttcttcttcctcttcc
tccagcagccacggtttaaatcatgactacgcctttgccaccccggtggaggtggacgct
caaggccaatacctgagccacgatgtgagccggcggagccgtcgcagcaggaggtccgtg
tcccagtcctcttccgtgcattaccgcctctctgtcttcggccgggacctgcatctggac
ctgcggccgtcgtcggtggtcgggccgggtttcacggtgcagacgttgggctcggacggc
atcgccacggtaaccagaggcgacgggtaccacgactgcttctatcaaggatctatccgg
gacctgtcgtcctcctcggcggctatatcgacgtgctcggggctgtcaggtttaatccgc
gtttccgagcacgactacttgatctcgcctctacctcagcatctggcaaatcgtcacaac
tacagcgcacccgacggtcaccacccgcacgtcgtctacaaacgctccgccgaacacgtg
gtccgacaacaagccggcgacctgtccggtttcgaaccttccacgtggcaccgggaccac
catcaacagccggacgaccaaaacgggcactcagaaaggcaacacttctgtgggcgccgc
aagcaatacactccaaaaccgcccgttgaggagcctttcctgatgccagatgagtttgcc
acgactgacgaagagggcccgggaaggccaaagcgatcgcctatcgactccaaccgggtg
ggaggtctgaatgtggagaccctggtggtggccgataggaagatgctggagaaacacggc
cgggagaacgtcaccacttatgtcctcactgtcatgaatatggtttccagtctgttcaaa
gacggcaccatcgggacagacatcaacattgtggtagttagcttattgctactggaacag
gacccgctgggtctgagcatcaatcatcacgccgaccagtcgctcaacagtttctgccag
tggcaatcgggattggtgggcaagagcgggaaacggcacgaccacgccgttctcctcacc
gggctggacatctgctcctggaagaacgagccctgcgacaccctgggttttgctccaatt
agcggtatgtgcagcaaataccggagctgcaccatcaatgaggacacgggactgggactg
gcgttcaccatcgctcacgaatccggacacaatttcgggatggtacatgacggtgaggga
aacccctgtcgtaaaaccgagggcaacatcatgtcccccacccttgccggtaacaacgga
gtcttctcttggtccatctgcagccgccagtacctgaaccgcttccttgggaccactcaa
gcgtcctgcctggtggacgagcccaagcagatcggtcagtacaaatatcccgagaagctt
cccggccagctgtacgacgccgacacgcagtgcaagtggcaattcggcgccaaggcaaca
ttatgcagtcttgactttgttaaggacatctgcaagtcactgtggtgtcaccgcacgggc
caacgatgcgaaaccaagttcatgcctgccgccgagggcaccagctgcgggcccgacatg
tggtgttggcgaggccagtgtgtcaaatacggggagcacggccccaaggcggttcacgga
cagtggtcgccctggtcccagtggtcggaatgttccagaacgtgcggaggcggggtcatg
tacagggagcgctcctgcaccagtccacggccccagcataacggcaagttctgctacggc
cccggccgccacaaccagctgtgcaacactcgagcgtgttcgcacaacagcgtggacttc
cgtacgcagcagtgcgccgaacacaacagcaaacccttcaggggctggtactacaagtgg
aaaccgtacaccaaagtggacgatgaagacgtctgtaaattgtactgcactgccgagagc
tttgatttcttcttcgccatgtccagcaaggtcaaagacggcacctcctgctccgaccac
agaggcgatgtttgcattgatggagtgtgtgagacggttggttgcgatcagattttagga
tccaaggcctccctggatgcttgcggcgtatgtaagggaagcaactccacatgtaaattc
tacaaaggcatgtacacgctgcagcatagagctaacgaatattattccatggtaaccatc
ccggcgggtgctcgtagcattcgcgtggaggagatggccgtgtctaccagctatctggcg
gtacgttccatcaagaggaagtactacctgaccggcgattggacggtggactggccgggc
aagttccactttggaggcgccacattcagctatcagcgctcttttagcaaacccgagagc
ctgtacgccgccggacccaccaatgaaacgctggtgtttgaaatcctcctgcaaggtaaa
aatccaggtgtggtttgggagtacacgctgcctcgtactgaaaggaagcccgactacagc
tggggtgtggtgcgttccgactgttctgctccctgcgccggaggtcgcatttccaccaag
gctatttgcctgcaggaccagaaagttcacgtcaacgccaccatgtgtaatccgctcaca
agacccacgttgggctcgcacctctgcaatacgcagccctgccctgcttactggtggact
ggagagtgggcggtgtgtagtcgctcgtgcggcggaggccagcagagcaggacgctacgc
tgcatgaggaaagtgacctaccaaagggaggaggcggcggcgcattccctctgccccgtc
gtctcaccggcgcaactccggccctgcaacacgcaggcttgcccgcccgggtggaacgcc
ggagcctggtcgcagtgctccaagagttgcggccgcggactgaggaagcgaagcgtgttc
tgccaaagcggcgacgccgggttggcggccgtggtgcccgacagcatgtgcagacacaac
gagcgacccaaagcccaggagagctgcgtcctgcgccgctgcccaaagaacgacaggctc
cagtggacgcccacgtcgtggggagagtgctccaggtcatgcggtcctggcctgcagaag
cgagaactccggtgtggggagaaagatttccagggagggtttgtggagtttcccgcaagg
aggtgcaggaaccttgccaaacccttggcggatctccagcaggtttgcgaccgaggtccc
tgccccgaattagcccgggtcccgcagggcaggaccgtccccggtgctgcggtgtcaagc
tggtactcatctccatggcaacagtgctccgtgtcctgcggtgggggtgtccagacccgc
ggcgtccagtgtctccttcagggaagggcggccagcgggtgcttggcccaccagcgacca
gttgctacccgggcctgcaacactcagttctgccctcgagccgccccgctgccacatcac
cacaatcgtgtcacagccgtcgggaccacaataagaggcgagccaccgtgcgtggaccgc
ttcagctggtgccacctggtcccccagcacggcgtctgcggccacaagttctacggagac
cagtgctgtcgctcttgcacgggcaggaggctctag
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