Syngnathus scovelli (Gulf pipefish): 125967245
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Entry
125967245 CDS
T08785
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320
PPAR signaling pathway
sscv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125967245 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125967245 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125967245 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125967245 (nr1h3)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125967245 (nr1h3)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
125967245 (nr1h3)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
125967245
NCBI-ProteinID:
XP_049574098
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Position
4:10879300..10888835
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AA seq
461 aa
AA seq
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MSTLPVTDIPDVGHDESKVFDGAAELQLHCMVESNGSMAMKHESLLSLGDLSQPDDFPAS
SHNGPTPTGISSPLPVELSDTKPDVGDTATSTDGQPVKRKKGPAPKMLGNEVCSVCGDKA
SGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNQRCEMDMYMRRKCQQCRLRKCREAGMLE
QCVLSEEQIRLKKMKKQHDEETARSSAVVTPTPPQEVASLDPQQQEMIEKLVAMQKQCNK
RSFLDRPKVTPWPQNQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQ
IALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGM
NDLQLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYITIKRPNDHLMFPR
MLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVTE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgctgcctgtgactgatatcccagatgttggtcatgacgagagtaaagttttt
gacggagctgcggaactgcaacttcattgcatggtggagagcaatggcagcatggcaatg
aagcacgaaagcctgctctctcttggtgacctctcccaaccagatgacttccctgcctca
tctcataatggcccaactcccactgggattagcagtcctttgccagtcgagctgagtgac
actaagcccgatgtgggcgacacagccaccagcacagatggtcagccggtaaagagaaaa
aagggtcccgccccgaagatgctgggaaatgaggtgtgcagcgtatgcggtgacaaagcc
tccggattccactacaatgtgcttagctgcgaaggctgcaagggcttttttcgacgtagt
gtcattaaaagtgcccagtactcctgcaagaacaaccaacggtgtgaaatggacatgtac
atgcggcgcaagtgccagcagtgccgcctgcgcaagtgtcgtgaggcaggcatgctagag
cagtgtgtgctttctgaggagcaaatccgtctgaagaagatgaaaaagcagcatgatgaa
gagacggcccgctcgtccgcagtggttactcccactcctccgcaggaagtagcttcactg
gatcctcagcagcaggaaatgattgagaagctggtggccatgcagaagcaatgcaacaag
agatcctttcttgatagaccaaaagtgacaccatggccgcagaatcaagatctacaaaat
cgagaagtgcgtcagcagcgttttgcccacttcactgagctggcgatcatgtcggtccag
gagattgtggattttgccaagcagcttcctggatttttagagctcacgagagaggaccag
attgctctattgaagacgtcaaccatagaaattatgctgctggagacatctcgtcgatac
aaccctgccattgacagcattacatttctaaaggattttagctacaataaggaggatttt
gcaaaagcaggccttcagtttgagttcattaatcccatctttgagttttctaaaggaatg
aatgacttgcagctggatgaagctgagtacgcactgctgattgccatcaacatattttct
gcagatcggccaaatgtgcaagatcatgatcttgtggaaaggctgcaacaaccttatgtt
gacgccctgcgctcttatatcacgataaagagaccaaatgatcacttgatgtttccacgc
atgctgatgaagctggtgagccttcgtacactgagcagcgtgcactctgaacaggttttt
gcccttcgtctccaggacaaaaagcttcccccgctgctctctgaaatctgggatgtcact
gaatga
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