KEGG   Syngnathus scovelli (Gulf pipefish): 125967245
Entry
125967245         CDS       T08785                                 
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03320  PPAR signaling pathway
sscv04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    125967245 (nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    125967245 (nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sscv03000]
    125967245 (nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:sscv03310]
    125967245 (nr1h3)
Transcription factors [BR:sscv03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    125967245 (nr1h3)
Nuclear receptors [BR:sscv03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   125967245 (nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 125967245
NCBI-ProteinID: XP_049574098
LinkDB
Position
4:10879300..10888835
AA seq 461 aa
MSTLPVTDIPDVGHDESKVFDGAAELQLHCMVESNGSMAMKHESLLSLGDLSQPDDFPAS
SHNGPTPTGISSPLPVELSDTKPDVGDTATSTDGQPVKRKKGPAPKMLGNEVCSVCGDKA
SGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNQRCEMDMYMRRKCQQCRLRKCREAGMLE
QCVLSEEQIRLKKMKKQHDEETARSSAVVTPTPPQEVASLDPQQQEMIEKLVAMQKQCNK
RSFLDRPKVTPWPQNQDLQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQ
IALLKTSTIEIMLLETSRRYNPAIDSITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGM
NDLQLDEAEYALLIAINIFSADRPNVQDHDLVERLQQPYVDALRSYITIKRPNDHLMFPR
MLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVTE
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgtcaacgctgcctgtgactgatatcccagatgttggtcatgacgagagtaaagttttt
gacggagctgcggaactgcaacttcattgcatggtggagagcaatggcagcatggcaatg
aagcacgaaagcctgctctctcttggtgacctctcccaaccagatgacttccctgcctca
tctcataatggcccaactcccactgggattagcagtcctttgccagtcgagctgagtgac
actaagcccgatgtgggcgacacagccaccagcacagatggtcagccggtaaagagaaaa
aagggtcccgccccgaagatgctgggaaatgaggtgtgcagcgtatgcggtgacaaagcc
tccggattccactacaatgtgcttagctgcgaaggctgcaagggcttttttcgacgtagt
gtcattaaaagtgcccagtactcctgcaagaacaaccaacggtgtgaaatggacatgtac
atgcggcgcaagtgccagcagtgccgcctgcgcaagtgtcgtgaggcaggcatgctagag
cagtgtgtgctttctgaggagcaaatccgtctgaagaagatgaaaaagcagcatgatgaa
gagacggcccgctcgtccgcagtggttactcccactcctccgcaggaagtagcttcactg
gatcctcagcagcaggaaatgattgagaagctggtggccatgcagaagcaatgcaacaag
agatcctttcttgatagaccaaaagtgacaccatggccgcagaatcaagatctacaaaat
cgagaagtgcgtcagcagcgttttgcccacttcactgagctggcgatcatgtcggtccag
gagattgtggattttgccaagcagcttcctggatttttagagctcacgagagaggaccag
attgctctattgaagacgtcaaccatagaaattatgctgctggagacatctcgtcgatac
aaccctgccattgacagcattacatttctaaaggattttagctacaataaggaggatttt
gcaaaagcaggccttcagtttgagttcattaatcccatctttgagttttctaaaggaatg
aatgacttgcagctggatgaagctgagtacgcactgctgattgccatcaacatattttct
gcagatcggccaaatgtgcaagatcatgatcttgtggaaaggctgcaacaaccttatgtt
gacgccctgcgctcttatatcacgataaagagaccaaatgatcacttgatgtttccacgc
atgctgatgaagctggtgagccttcgtacactgagcagcgtgcactctgaacaggttttt
gcccttcgtctccaggacaaaaagcttcccccgctgctctctgaaatctgggatgtcact
gaatga

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