Syngnathus scovelli (Gulf pipefish): 125968505
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Entry
125968505 CDS
T08785
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125968505 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125968505 (psen2)
Peptidases and inhibitors [BR:
sscv01002
]
Aspartic peptidases
Family A22: presenilin family
125968505 (psen2)
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Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF3377
Motif
Other DBs
NCBI-GeneID:
125968505
NCBI-ProteinID:
XP_049575616
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Position
5:complement(45645..49677)
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AA seq
390 aa
AA seq
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MNVSDSEDSAYTERTALVQSENPAVPSYRPDRRPSQRAGDDEELSLKYGAKHVIMLFVPV
TLCMLLVVATIKSVHFYSDKTDQQLIYTPFTENTSSVGRRLLNSVLNAVVMSSVIVVMTV
FLVFLYKYRCYKLIHGWLILSSLLLLFWFSFMYLSEVLKTYNVAMDYPTAGVLIWNFGAV
GMTCVHWKGPLALQQAYLIVVSALMALVFVKYLPEWSAWLILASVSIYDLVAVLSPKGPL
RMLVETAQERNEPIFPALIYSSAMAWTVATASPEDGEPGREADEEAEPSSEGAAEDEQEE
RGVKLGLGDFIFYSVLVGKAAASGADWNTTVACFVAILIGLCVTLLLLAIFKKALPALPI
SIAFGLIFYFATDSLVRPFMDDLAAHHFYI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcggacagcgaggacagcgcctacacggagcgcacggcgctcgtccaatcg
gagaatccggcggtgccgtcctaccgaccggaccggcgcccgtcccaaagggctggcgat
gacgaggagctgagcctgaagtacggcgccaagcacgtcatcatgctctttgtgcccgtc
acgctgtgcatgctgctggtggtcgccaccatcaagtcggtgcacttctacagcgacaag
acggaccagcagctcatttacacgccattcacggagaacacgtcgtcggtgggtcggcgc
ctcctcaactctgtcctgaatgccgtcgtcatgagcagcgtcattgtggtcatgaccgtc
ttcctggtcttcttgtacaagtaccgctgctacaagctgatccacggctggctcatcctg
tcttccctcttgctgctcttctggttcagcttcatgtacctcagcgaggtgctcaagacg
tacaacgtggccatggactacccgacggctggcgtgctgatctggaactttggtgcggtg
ggcatgacctgcgtccattggaagggtccgctggcgctgcagcaggcctacttgatcgtg
gtcagcgcactcatggcgctcgtctttgtcaagtacctgcccgagtggtcggcctggctc
atcctggcgtccgtctccatctacgacttggtggccgtcctaagtccaaagggtccgctg
aggatgctggtggaaacggcgcaggagcgcaatgagcccatcttccccgccctcatctac
tcgtccgccatggcgtggactgtggcgacggcgagtccagaggacggtgagccgggacgt
gaggcagatgaggaggcggagccgagcagcgagggtgcggcggaagatgagcaggaggag
cgtggcgtgaaactcggcctgggcgacttcattttctacagcgtcctggtgggcaaagcg
gcggccagcggcgccgattggaacaccaccgtggcctgcttcgtcgccatcttgatcggt
ctgtgcgtgacgctgttgctgctggccatcttcaagaaagcgctgccggcgttgcccatc
tccatcgccttcggcctcatcttctactttgccaccgactcgcttgtgcgacctttcatg
gacgacctggccgcgcaccacttttatatctga
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