Syngnathus scovelli (Gulf pipefish): 125968594
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Entry
125968594 CDS
T08785
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082
ATP-dependent chromatin remodeling
sscv04145
Phagosome
sscv04210
Apoptosis
sscv04510
Focal adhesion
sscv04520
Adherens junction
sscv04530
Tight junction
sscv04810
Regulation of actin cytoskeleton
sscv04814
Motor proteins
sscv04820
Cytoskeleton in muscle cells
sscv05100
Bacterial invasion of epithelial cells
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125968594
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125968594
09143 Cell growth and death
04210 Apoptosis
125968594
09144 Cellular community - eukaryotes
04510 Focal adhesion
125968594
04520 Adherens junction
125968594
04530 Tight junction
125968594
09142 Cell motility
04814 Motor proteins
125968594
04820 Cytoskeleton in muscle cells
125968594
04810 Regulation of actin cytoskeleton
125968594
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125968594
05100 Bacterial invasion of epithelial cells
125968594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125968594
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125968594
03036 Chromosome and associated proteins [BR:
sscv03036
]
125968594
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125968594
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125968594
04147 Exosome [BR:
sscv04147
]
125968594
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125968594
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
125968594
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
125968594
NuA4 complex
125968594
Chromatin remodeling factors
BAF complex
125968594
PBAF complex
125968594
GBAF(ncBAF) complex
125968594
SWR1 complex
125968594
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
125968594
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
125968594
Exosome [BR:
sscv04147
]
Exosomal proteins
Proteins found in most exosomes
125968594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
125968594
NCBI-ProteinID:
XP_049575791
LinkDB
All DBs
Position
5:935114..939077
Genome browser
AA seq
375 aa
AA seq
DB search
MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaaattgccgccctggtcgtggacaatggctccggaatgtgcaaagctggc
tttgcgggagatgacgccccacgcgcagtcttcccctccattgtgggacggcccaggcat
cagggcgtgatggttggcatgggccagaaggactcgtacgtgggcgacgaggcccagagc
aagaggggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag
caccctgtgctgctcaccgaggcccccctcaaccccaaggccaaccgcgaaaagatgacc
cagatcatgtttgagaccttcaacacacccgccatgtacgtggccatccaggccgtgctg
tccctgtacgcgtctggccgcaccaccggcatcgtgatggactccggtgacggcgtcacc
cacacggtgcccatctacgagggctacgcgttgccccacgccatcctcaggctggacctg
gctggccgcgacctcacagactacctcatgaagatcctcaccgagcgcggctacagcttc
accaccactgctgagcgtgaaatcgtgcgtgacatcaaggagaagctgtgctacgtggcg
ctggactttgaacaggagatgggcacggccgcctcttcatcctctctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggcaatgagaggttccgctgccccgaggca
ctcttccagccttccttcctgggcatggagtcgtgcggcatccacgagaccaccttcaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacacggtgctgtca
ggcggcaccaccatgtatcccggcatcgccgaccgcatgcagaaggagattacttccctg
gcccccaccaccatgaagatcaagatcatcgctccccccgagaggaagtactccgtttgg
atcggcggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtccggccccagcatcgtccacaggaagtgtttctaa
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