KEGG   Syngnathus scovelli (Gulf pipefish): 125968594
Entry
125968594         CDS       T08785                                 
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082  ATP-dependent chromatin remodeling
sscv04145  Phagosome
sscv04210  Apoptosis
sscv04510  Focal adhesion
sscv04520  Adherens junction
sscv04530  Tight junction
sscv04810  Regulation of actin cytoskeleton
sscv04814  Motor proteins
sscv04820  Cytoskeleton in muscle cells
sscv05100  Bacterial invasion of epithelial cells
sscv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125968594
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125968594
  09143 Cell growth and death
   04210 Apoptosis
    125968594
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125968594
   04520 Adherens junction
    125968594
   04530 Tight junction
    125968594
  09142 Cell motility
   04814 Motor proteins
    125968594
   04820 Cytoskeleton in muscle cells
    125968594
   04810 Regulation of actin cytoskeleton
    125968594
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125968594
   05100 Bacterial invasion of epithelial cells
    125968594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125968594
   03019 Messenger RNA biogenesis [BR:sscv03019]
    125968594
   03036 Chromosome and associated proteins [BR:sscv03036]
    125968594
   03029 Mitochondrial biogenesis [BR:sscv03029]
    125968594
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sscv04812]
    125968594
   04147 Exosome [BR:sscv04147]
    125968594
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125968594
Messenger RNA biogenesis [BR:sscv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     125968594
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     125968594
    NuA4 complex
     125968594
  Chromatin remodeling factors
   BAF complex
    125968594
   PBAF complex
    125968594
   GBAF(ncBAF) complex
    125968594
   SWR1 complex
    125968594
Mitochondrial biogenesis [BR:sscv03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    125968594
Cytoskeleton proteins [BR:sscv04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     125968594
Exosome [BR:sscv04147]
 Exosomal proteins
  Proteins found in most exosomes
   125968594
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 125968594
NCBI-ProteinID: XP_049575791
LinkDB
Position
5:935114..939077
AA seq 375 aa
MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggaagaggaaattgccgccctggtcgtggacaatggctccggaatgtgcaaagctggc
tttgcgggagatgacgccccacgcgcagtcttcccctccattgtgggacggcccaggcat
cagggcgtgatggttggcatgggccagaaggactcgtacgtgggcgacgaggcccagagc
aagaggggcatcctgaccctcaagtaccccatcgagcacggcatcgtcaccaactgggac
gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtggcccccgaggag
caccctgtgctgctcaccgaggcccccctcaaccccaaggccaaccgcgaaaagatgacc
cagatcatgtttgagaccttcaacacacccgccatgtacgtggccatccaggccgtgctg
tccctgtacgcgtctggccgcaccaccggcatcgtgatggactccggtgacggcgtcacc
cacacggtgcccatctacgagggctacgcgttgccccacgccatcctcaggctggacctg
gctggccgcgacctcacagactacctcatgaagatcctcaccgagcgcggctacagcttc
accaccactgctgagcgtgaaatcgtgcgtgacatcaaggagaagctgtgctacgtggcg
ctggactttgaacaggagatgggcacggccgcctcttcatcctctctggagaagagctac
gagctgcccgacggacaggtcatcaccatcggcaatgagaggttccgctgccccgaggca
ctcttccagccttccttcctgggcatggagtcgtgcggcatccacgagaccaccttcaac
agcatcatgaagtgcgacgtggacatccgtaaggacctgtacgccaacacggtgctgtca
ggcggcaccaccatgtatcccggcatcgccgaccgcatgcagaaggagattacttccctg
gcccccaccaccatgaagatcaagatcatcgctccccccgagaggaagtactccgtttgg
atcggcggctccatcctggcctcgctgtccaccttccagcagatgtggatcagcaagcag
gagtacgacgagtccggccccagcatcgtccacaggaagtgtttctaa

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