Syngnathus scovelli (Gulf pipefish): 125969257
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Entry
125969257 CDS
T08785
Symbol
cxcl12b
Name
(RefSeq) chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04060
Cytokine-cytokine receptor interaction
sscv04672
Intestinal immune network for IgA production
sscv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125969257 (cxcl12b)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125969257 (cxcl12b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
125969257 (cxcl12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sscv04052
]
125969257 (cxcl12b)
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125969257 (cxcl12b)
Cytokines and neuropeptides [BR:
sscv04052
]
Cytokines
Chemokines
125969257 (cxcl12b)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Chemokines
125969257 (cxcl12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
125969257
NCBI-ProteinID:
XP_049577102
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All DBs
Position
5:8599553..8610310
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AA seq
102 aa
AA seq
DB search
MDVKLLPLMLLLAVVTHGPTSTAKPISLVERCWCRSTLNTVPQRSIKELKFLHTPNCPFQ
VIAKLKSNREVCINPETKWLQQYLKNAINKVKKSRRRNNKRN
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaaacttctgccactgatgcttctcttggccgtggtcacacatggacctaca
agtaccgcaaagcccatcagtctggtggagaggtgttggtgtcgttctactctcaacacg
gttccccagcgctccatcaaagaactcaagttcctccacacacccaactgtccattccaa
gtcattgccaaactgaagagcaacagggaagtttgcatcaacccagaaaccaagtggctg
cagcagtacttaaagaacgccataaacaaggtgaaaaagtcaagaagacgcaacaataag
aggaactaa
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