Syngnathus scovelli (Gulf pipefish): 125969584
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Entry
125969584 CDS
T08785
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125969584 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125969584 (nthl1)
Enzymes [BR:
sscv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
125969584 (nthl1)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125969584 (nthl1)
Prokaryotic type
125969584 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_8
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
125969584
NCBI-ProteinID:
XP_049577772
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Position
5:complement(9158187..9160981)
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AA seq
441 aa
AA seq
DB search
MEIIKEFALFPFPPNTTLTFVPRCSCFLHVCCSGSMCNAVWCFRMTSPYFSQSMPVVTRR
AEKRASCTAAASLLRRRRDADARSSVAIKTEEEETRVSQQTASLSTLDGGTQDLLQLATT
QPKLELDAPLLSSQSRRRRKLKVEYDEGGSQVKTEHWEPPAWKTQLGHIREMRSSRDAPV
DSMGAKKCCDTEAPANVRRFQVLVSLMLSSQTKDQVTAAAMQKLRAHGCTAEKLLSTDDE
TLGKLIYPVGFWRNKVKFLKMTAAMLVKDYGGDIPDSLEGLVRLPGVGPKMAHLAMDIAW
DQVSGIGVDTHVHRISNRLGWLRKPTKNPEATRKALQEWLPRDLWSEINWLLVGFGQQVC
LPTNPLCSLCLNQYSCPSAHQSSPAKLLKVRSPRSLCTDALFEAKTESGQETVFNVEKKE
EPQSVSPTTQGRKLKRNIKHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagattatcaaagagttcgcacttttccctttccctccaaacactacgctgactttt
gttccgagatgttcctgctttcttcatgtctgctgcagcgggagcatgtgcaatgcagtg
tggtgtttcagaatgacttctccttatttttctcaaagcatgccagttgtcactcgaaga
gctgagaagcgtgccagctgcaccgctgctgcctctcttctgcgcagacgaagggacgcg
gatgcccggtcctcggttgctatcaaaacagaagaggaagagacgagagtctcccaacaa
acagcttccttatcaacactagatggtggtactcaggacctcctccagctggccaccact
caaccaaaactagaattagatgctccgttgttatcttcgcaaagccgcaggcgtagaaaa
ttaaaggtggagtacgatgaaggtggctcacaggtgaagacggaacattgggaacctcct
gcttggaagacacagttgggacacattcgtgagatgaggagcagccgtgatgctcccgtt
gatagcatgggagcaaagaagtgctgtgacactgaggctccggctaatgtgagacgcttc
caggtgttggtgtcactgatgctgtccagtcagaccaaagaccaggtgacagcagctgct
atgcagaagcttagagctcatggctgtactgccgaaaaactcctgtctactgatgatgaa
actcttggaaaactcatctacccagttggcttctggaggaacaaagtcaaatttctgaag
atgacagcagccatgcttgtgaaggattatggtggggacatcccagacagcttggagggg
cttgttcgtctgccaggggtgggacccaagatggctcacctggctatggatatcgcctgg
gaccaggtctccggtataggtgtagacacacacgtccatcggatctcaaacaggctggga
tggctcaggaagcccactaagaaccctgaggcgacacgcaaggccctacaggaatggtta
ccccgggatctttggagcgagattaactggctacttgtgggttttggacagcaggtttgc
cttccaaccaacccgctctgctccctgtgtttgaaccaatacagctgcccatcagctcac
caaagctctcctgcaaagctgcttaaagttcgatcgccgcgctctctctgtacagacgct
ttatttgaagcaaaaactgaatctggacaagaaactgtttttaatgtggaaaagaaagaa
gagccacagagtgttagtcccaccacacagggaaggaaactgaaacgaaacattaaacac
gaataa
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