Syngnathus scovelli (Gulf pipefish): 125970130
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Entry
125970130 CDS
T08785
Symbol
fads2
Name
(RefSeq) acyl-CoA 6-desaturase isoform X1
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00592
alpha-Linolenic acid metabolism
sscv01040
Biosynthesis of unsaturated fatty acids
sscv01100
Metabolic pathways
sscv01212
Fatty acid metabolism
sscv03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
125970130 (fads2)
01040 Biosynthesis of unsaturated fatty acids
125970130 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125970130 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sscv01004
]
125970130 (fads2)
Enzymes [BR:
sscv01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
125970130 (fads2)
Lipid biosynthesis proteins [BR:
sscv01004
]
Desaturase
Front-end
125970130 (fads2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Virul_fac_BrkB
GH-E
Motif
Other DBs
NCBI-GeneID:
125970130
NCBI-ProteinID:
XP_049578103
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Position
6:complement(5988060..5993282)
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AA seq
439 aa
AA seq
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MGAGDQQTEPAGSALFTWEEVQKHCSRNDQWLVINRKVYCVTEWAKRHPGGFRVIRHYAG
EDATEAFTAFHPDKKYVQRFLKPLLIGELAETEPSQDREKNVAVIQDFRALHAYAEQKGL
FQAHSLFFLSHLAHILLMELLAWLLIRLGGTGWIPTALCSILMATAQIQAGWLQHDFGHL
SVFKKSSWNHLTQQFLIGHLKGGSANWWNHRHFQHHAKPNVFSKDPDVNMLKIFVVGATQ
PVEYGTKKIKLLPYNHQHHYFFLVGPPLLIPIYFQLQIMRVMISRCDWVDMVWCFSYYLR
YFSCYVPLYGLLGSVALIMFVRFLESHWFVWVTQMNHLPMDIDHEKHQDWLSLQLQATCN
IEKSPFNDWFSGHLNFQIEHHLFPTMPRHNYHRVAPLVRALCEKHKIPYQVKTMGEGLVD
VFSSLKTSGSLWLDAYLHK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccggggaccagcagacagaaccagcgggcagcgctcttttcacctgggaagag
gtgcagaaacactgcagcagaaatgatcagtggttggtgatcaatcggaaggtgtactgc
gtcaccgagtgggccaagaggcatcctggaggctttcgggtcatccgacattatgctgga
gaggatgccacggaagcgtttactgcttttcatcctgacaagaagtatgtgcaacgcttt
ttaaagcccttgctgattggcgagctggcggaaacagaacctagccaggacagagagaaa
aatgttgcagtcatccaggatttccgggctttacatgcatatgcagagcaaaagggtctg
tttcaggcccactctttgttcttcttatcccatttggctcacatcctgctgatggagctc
ctagcctggttgctcatacgtctcggggggaccggctggattccgacggcgctctgttcc
atcttaatggcaactgcacagatccaggctggatggctgcagcatgattttggtcatctg
tctgtcttcaagaaatcctcatggaatcatcttacgcaacaatttctcattgggcacttg
aagggaggttctgctaactggtggaatcatcgacactttcagcatcacgctaaacccaac
gtctttagtaaagacccagacgtcaacatgctgaagatatttgttgtcggagccactcag
ccagtagagtatggcaccaaaaagatcaaacttctgccctacaaccatcagcaccactac
ttcttcctggttggacctccactgctaattccaatttatttccaacttcaaatcatgcgt
gtgatgatctcacggtgtgactgggtggatatggtctggtgcttttcttactaccttcgc
tacttcagttgttatgttccactttatggtctcctgggctcagtggcgctcatcatgttt
gtcaggtttctagagagccactggttcgtgtgggtgactcagatgaatcacctccccatg
gacattgaccacgagaagcatcaagactggctcagcttgcagctacaagccacctgcaac
attgagaagtcccccttcaacgactggttcagtgggcatctcaatttccagatagaacat
catcttttcccaaccatgccgcgtcacaactaccaccgggtggcgccattggtgcgcgcc
ctgtgtgagaaacataaaattccttaccaagtgaagacaatgggggaaggtctggttgat
gtcttcagttcactgaagacttcagggagtctgtggcttgatgcatatcttcataaatga
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