Syngnathus scovelli (Gulf pipefish): 125972343
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Entry
125972343 CDS
T08785
Symbol
ints4
Name
(RefSeq) integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125972343 (ints4)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
125972343 (ints4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
PDS5
Cnd1
INTS7_N
Adaptin_N
SCD
Vac14_Fab1_bd
VPS15-like_hel
Cnd3
Motif
Other DBs
NCBI-GeneID:
125972343
NCBI-ProteinID:
XP_049581927
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All DBs
Position
7:218469..232171
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AA seq
965 aa
AA seq
DB search
MAAHLKKRVYEEFSRVVQVPAEEVASKKLRLCKPSKSAALHVDLCKAANATDALHFLLHF
ARKPVEAESVEGVVRILLEHYYKETDNSVRLKIASLLGVLSTTPGFSPDCIVEDVVAAVA
NEKSHQVLAQLLDSLLTAGAQLAENPAVARRLLEVARQHLSDASFGVRIKCLQLLGRVGV
ADGEAPAGAARDDAPAVISDFFADQDPRVRTAALKAMLQLHERGTKIQQVIYEQACRLLA
DDYEQVRSAAVGMVWVLSVLYPESIVPIPSSNEEVRLVDDAFGKISHMVSDGSWMVRVQA
AKTLGSMSQVSPHFLEQTLDKKLMSDLRRKRTAHERAKELFASGEFSSGRKWADDAPKEK
VDTNTVNLIASGACGAFVHGLEDEMFEVRIAAVEALCRLARSSAGFAEKCLDFLVDMFND
EIEEVRLQSIHVLREISTHITLREDQLDTVLAVLEDSSRDIREALHELLCYTNVSTKECV
QLALLELLKNLNKYPADRNSVWKCLKFMGARHPMLVLPLVPELLSTHPYFDTPEPDMDDP
AYIAVLVLVFNAAKSCPTMPALFSDHTFRHYAYLRDSLSHLVPPLRLPGRKQLHALDSAD
CQGVESARLFLQQSLERVSTIQNLEAPGAQDLLVFTIRDLERLGQLQTELAGAADFCATY
LRCQLLLIKALQEKLCKMPVALCWRQSGTAVAAAQQVLEETYKLEFMYSGLESRQVAVIH
HVRLQAKALQLVLSARAAPGQDALASACEKFLQELDSFHRLFAAELPHLQDSFADKLAEA
TPPRPSSRKPAELLRILETSLRQSALLPLCLPPQIHRATANIIEPTGESDNPLKFTSGLV
VALDVDATLEHVRDPHNSVKVEVLYPDGQSHVIHPKPGDFRQPGPHRHRLITQVYLSHGA
WTEPSQVEVRLLLAYSSSSSSSASDSKLAWSDSVDGLPPAEGAVEGTIAFSKPVKVFIMP
KPARR
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcatttaaaaaagcgagtttatgaggaattctccagagtcgtacaggttcct
gccgaagaagttgcgtccaagaagcttcgtctgtgcaagcccagcaagtcggcggctctc
cacgtggatctgtgcaaggccgccaacgccaccgacgctttgcacttcctgctgcacttt
gcccgcaagcccgtggaggccgagagcgtcgagggtgtcgtcaggatcctcctggagcac
tactacaaggaaacggataactcggtgcgactgaagatcgcgtccctgctgggcgtcctg
tccacaactccgggcttcagtcccgactgcatcgtggaggatgtcgtggcagccgtggcc
aacgagaagtcccatcaggtcctggcgcagcttctggacagccttctgacggcaggcgct
cagcttgcggagaacccggcggtggcgcggcggctgctggaggtggcccgccagcatctg
tcggacgcctccttcggagtgaggatcaaatgtctgcagctgctgggacgtgtgggcgtt
gcggacggcgaggcccccgcaggcgcggcccgggacgacgcgcccgccgtcatcagcgac
ttctttgccgatcaggaccccagagtgcgcacagcggccctaaaagcaatgctgcagctg
catgaaagaggcaccaagattcagcaggtgatttacgagcaggcgtgccggctgctggcg
gacgactacgagcaggttcgctcggccgccgtcggaatggtttgggtgctgagcgtcttg
tatcccgagagcatcgtgcccatcccgtcgtccaacgaggaggttcggctggtggacgac
gccttcgggaagatcagtcacatggtcagcgacggctcgtggatggtgcgcgtgcaggcc
gccaaaacgctgggttccatgtcgcaggtgagtcctcacttcctggagcagacgctggac
aagaagctgatgtccgatctgaggaggaagcgcacggcccacgagcgcgccaaggagctc
tttgcttcgggtgagttctcgtccggcaggaagtgggccgacgacgcccccaaggagaaa
gtggacaccaacacggtcaacctgatcgcctcgggagcctgcggagccttcgtccacggc
ctggaggacgagatgtttgaggtacgcatcgcggcggtggaggctctgtgccggctggcc
cgctcgtcggccggcttcgccgagaagtgtctggacttcctggtggacatgttcaacgac
gagatcgaggaggtgcggctgcagtccatccacgtgctccgagaaatctccacgcacatc
acgctccgggaggaccagctggacacggtgctggctgttctggaggactcgtctcgcgac
atccgagaagctctgcacgagctgctgtgctacaccaacgtgtccaccaaggagtgcgtc
cagctggccctgctggagctgctcaagaacctcaacaagtatcccgccgaccgtaactca
gtctggaagtgtctcaagtttatgggggcgcgccaccccatgctggtcttgccgctggtc
ccggaactcctcagcacgcacccttactttgacacaccggagcccgacatggacgacccg
gcctacatcgccgtcctggtcttggtcttcaacgcggccaagtcgtgtcccaccatgccg
gcgctcttctccgaccacacctttagacactacgcctacctgagggacagcctgtcgcac
ctggtgccgcctctgcggctgccgggcaggaagcagctccacgctttggactctgccgac
tgtcaaggcgtggagtcggcgcggctctttctgcagcaaagtctggagcgggtgagcacc
atccagaacctggaagcgcccggagctcaggacctgctcgtcttcaccatacgtgacttg
gagaggctgggtcagctgcagacagaactcgccggagcggccgacttctgcgccacctac
ctacgctgccagcttctcctcatcaaggctctgcaggagaaactgtgcaagatgccggtg
gctctctgctggaggcagagcggcacggccgtggcggctgcccagcaggtcttggaggag
acctacaagctggagttcatgtacagcggtctggagagccgacaggtggccgtcatccat
cacgtgcggctccaggccaaagcgctgcagcttgttctcagcgcgcgcgccgcacccggg
caggatgctctcgccagtgcctgtgaaaagttcctgcaggagctggactccttccacagg
ctgtttgcggccgagctccctcacctgcaagacagctttgcggacaagctggcggaggcc
acgccgccgcgcccgtcgtcccgcaaaccggccgagctgctccgcatcctggagacctcg
ctgaggcagagcgccctgctgccgctctgcctcccgcctcagatccaccgagccacggcc
aacatcatcgagcccacgggagagtcggacaacccgctcaagttcacgtcgggcctggtg
gtggcgctggacgtcgacgccactctggagcacgtccgcgacccgcacaactcggtcaaa
gtggaggtcctttatcccgacggccagagtcacgtgatccaccccaaaccgggagacttc
cgccagccgggaccgcaccgccacaggctcatcacgcaggtctacctatcgcacggcgcc
tggacagagccttctcaggtggaggtgcgtctgctgctggcctacagctcctcgtcgtcg
tcctcagcgagcgactccaagctggcgtggagcgacagcgtggacggcctcccgccggcg
gagggcgccgtcgaaggaaccatcgccttcagcaagcccgtcaaagtcttcatcatgccc
aagcctgccagacgctaa
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