Syngnathus scovelli (Gulf pipefish): 125973521
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Entry
125973521 CDS
T08785
Symbol
trim63b
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63
KO
K10655
tripartite motif-containing protein 63 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125973521 (trim63b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125973521 (trim63b)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125973521 (trim63b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125973521 (trim63b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-B_box
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_6
Sina_RING
zf-RING_11
FUSC
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
125973521
NCBI-ProteinID:
XP_049583745
LinkDB
All DBs
Position
8:complement(17876757..17878301)
Genome browser
AA seq
346 aa
AA seq
DB search
MDVHRTGSLVRAPSPMDSLEKQLSCPICLDMFTKPVVILPCQHNLCRSCASDLYDSRNPY
RFSGGVFRCPTCRFEVVLDRHGVHGLQRNLLVENIIDIYKQQQEVSGGGGNTESSLKPKE
SKEPKCQEHEDERINIYCKSCQTPTCSMCKVFGQHKDCEVAPLESVFQSQKTELSNAIDG
LVASNSRLQSLLIQMEDACRVVQENAQRAKQSLAERFDLLYAVLEERKTVLLEQIGKEQD
QKVATLRALSQRYGERLQASTDLTDSAVRALEQSGAAEFLVAAKGLITQTKDAAKGSAGE
ERPEPGFEKMDHFAVSTEHVEALLAKMDFGSDDEDDFDDAEEEEEE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacaggaccggatcgttggttcgcgctccgagccccatggacagcctggag
aaacaactgagctgccccatctgccttgacatgttcaccaagccggtggtcatcctgccc
tgccagcacaacctgtgccgcagctgcgccagcgacctctacgactcgcgcaacccctac
cgcttctccggcggcgtcttccgctgccccacctgcaggttcgaggtggtgctggaccgc
cacggcgtgcacgggctccagcgcaacctgctggtggagaacatcatcgacatctacaag
cagcagcaagaagtgagcggcggcggcggcaatacggaaagctccctcaagcccaaagag
tccaaggagcccaaatgccaggagcacgaagacgagagaatcaacatttactgcaaaagc
tgccagactccgacctgctccatgtgcaaagtgtttggccagcacaaggactgcgaagtg
gcacccctggagagcgtctttcagagccaaaagaccgaactgagcaacgccatcgacggc
ctggtggccagcaacagccgcctgcagtctctgctcatccagatggaagacgcctgccgc
gtcgtccaggaaaacgcccagcgcgccaagcaaagcctggccgagcgcttcgacctgctc
tacgccgtcctggaggagcgaaagaccgtcctcctggagcagatcggcaaggagcaagac
cagaaggtggccacgctgcgggcgctgtcccagcgttacggcgagcgactccaagccagc
accgacctgaccgactcggccgtcagggccctggagcagagcggcgccgccgagttcctg
gtggcggccaagggcctcatcacgcagaccaaagacgcggccaaaggctcggcgggcgaa
gagcgccccgagcccggtttcgagaagatggatcatttcgccgtgtcgacggagcacgtg
gaagcgctgctggccaaaatggactttggctccgacgacgaagatgattttgacgatgcc
gaggaggaagaggaggaatga
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