Syngnathus scovelli (Gulf pipefish): 125974174
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Entry
125974174 CDS
T08785
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125974174 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125974174 (gli2a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
125974174 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
125974174
NCBI-ProteinID:
XP_049585066
LinkDB
All DBs
Position
8:6976082..7088466
Genome browser
AA seq
1500 aa
AA seq
DB search
METSAPAATEKKECKGTGLDGSSFSEIPKKPSPTSRGVHHIFPTFHTPIPIDMRHHEGRY
HYEPHPLHTMHGGPGLTGSPVISDISLIRLSPHAPTGPGESPFSPPHPYVSPHMEQYLRS
VHGSPTLSMISAARGLSPAEVTHEHLKDRALFTLPPPPPPGANPTEYYHLMASASQRNPY
GDLLMQSGAAAAAAATAHLPDYISPVDVSRFSSPRMTPRLSRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFSFPHPINPVAYQQLLSQQRGLN
AFGHTPPLIQPPPSSFSARQRSLVTPPMSTSHNSTTSEANQNASGDPAVSSTVNPLNSKR
TKIKMEVEGPLPISPTSLDHGGGMLEMSEELDKDECKQEPEAIYETNCHWEGCTKEYDTQ
DQLVHHINNDHIHGEKKEFVCRWVECSRDQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCT
KAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIVGC
TKRYTDPSSLRKHVKTVHGPEAHVTKKQRSDAPRGLQPPKDNGENEFHSKNGTGSVDERT
DAKGTMRSMEDCLQVKSIKTENSIMYQSSPGGHSSCSSQPSPLSSTNNNDSGVEMAMHSG
GSFGDLSAQDGCPLVDSTVPAGGQQTGMGLQLRKAVSHCGTVTIKMETIKKEKLKTVRDS
CPWVNSAPQTLQGQRNNTKLPPIPTAGSLLENSNLTTNLNSLHNGQRFGDQSLCEVTLLN
QLNDRRNSTTSTISSAYTMSRRSSGISPCYSSRRSSEASQFGANRHNNISSADSYDPIST
DLSRRSSEASHCGGGGAGGAGGGNLPSLLSLTPAQHYRLKAKYAAAIGGAPPTPLPNMER
MSLRTRMALYSDSQEYSTHHYHQPLSGNVPRRCSDTGYGNHSLMPHEVPANLPRRASDPV
RCPTHDTLSTVPRYNSMNSMNSSSECHQALAMYGYTRSDGNLQRYPFAPRPPSISENVAM
ENMAVDGMGNGGEQDAEDDIVLPDDMVQYLRSQNPGNQGHNLGQGNYQFNNQSQGYQTGS
APLASFYFQRRGPLFDACLMQSGQDMNHSEPQEPFSTSSHINKNNMPVQWNEVSSGTVDT
ATKLPKQQHSLRGNLTVVPQRNNFASFQAQGQGLGSNQQVVPMNQNMYKQGYANHNNKRL
NNPHHQQKQCSTLKLNDQSSVQGFSQDTIQNSISASNNVRATRNNVMDQGVQSYRGRAQP
DEYSHINHVVYQQQHYNISSQHNNIQNGTSVMLPPRPPVEPKPGGRQHPVSGMMQLNRIP
KLSDVSPGLRNNTSEASPKRPNGTATLRNNSENPNSAMFYTGEIHFFEQTPAAFEASVSP
SVSQTPANNNIALSNMVSPGVNQVSSSTVDSSTGRNGGAEHTQIDFDSILDDGDHASLMS
GTLSPGLLQSLSQNSSRLTTPRNSVTLASVPAGIGNMAIGDMSSMLTALAEESKFLNMIS
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcagctccagctgccactgagaagaaggagtgcaaaggtactggtttggat
ggaagcagcttctcagaaattccaaagaagccctcccccacctccagaggtgtacaccac
atcttcccgacatttcacacacccatcccaatcgacatgagacaccatgaggggcggtac
cattatgaaccccaccctctgcacaccatgcatggaggtccgggactaactggcagtcca
gtcatctcagacatctccttgattcgtctatcgccccatgcaccgactgggccgggtgag
tctccattcagccctccacatccctacgtcagcccacacatggagcaatacctacgctca
gtacatggaagccccaccctctccatgatctcagcggcaagaggactgagccctgccgaa
gttacccatgaacacttaaaagaccgggccctattcactctccctccaccaccaccacca
ggggccaatcccacagaatattaccatctgatggccagtgctagccagcgaaatccatat
ggagacctcttgatgcaaagcggtgcagcggcagcagcagcagcgacagctcatttacca
gattacatcagtccagtggatgtgtcgcgtttttccagtcctcggatgacaccccgactg
agcaggaaaagggcactatccatctctccgctatcagatgccagcatcgacctgcagacc
atgatccgtacctcacccaactccctggttgcctatatcaacaactcccgttctagttcg
gctgccagcagctcctatggacacctttcagttggaggaatcagcccttcattcagcttc
cctcatcccattaacccagtggcgtatcagcagttgttgtcgcaacagagaggtctgaat
gcctttggccacactccccctctcattcaaccgccaccatcctcgttctctgcccgccag
cgttccctggtcactccccctatgtccacttctcataacagcactacatcagaagctaat
cagaatgccagtggagatccagccgtgagcagcacagtcaacccattgaactccaaaagg
acaaagattaaaatggaagtcgaaggacctctgcccatctcaccaacctctctggaccat
ggtggtggaatgctggaaatgagtgaggagcttgataaagatgagtgcaaacaggaacct
gaggccatatatgagactaactgccactgggaaggttgtaccaaggagtatgatacccaa
gaccaacttgtacatcacatcaacaatgaccacatccatggtgaaaagaaggagtttgtg
tgtcggtgggtggagtgttctcgagaccaaaagcccttcaaggcccaatatatgctggtg
gtccacatgaggagacacacgggagagaagccgcataaatgcacatttgagggctgcaca
aaagcttactcccgtctagagaatctcaagacccaccttcggtctcacactggggagaag
ccctatgtgtgtgagcatgaaggctgcaacaaggctttctcaaatgcttcagaccgagcc
aagcatcagaatcgtacacattctaatgagaaaccatatgtatgtaaaattgtgggttgt
accaagcgctacacagaccccagctctctcaggaagcatgttaagactgttcacggaccg
gaggctcatgtcaccaagaaacagcgaagtgacgctcctcgaggacttcaacctcccaaa
gacaatggcgagaatgagttccattctaaaaatggcacaggaagtgtggatgaaaggacc
gatgccaaaggcaccatgagaagcatggaagactgtctacaagtcaaatcaatcaagact
gagaattccattatgtatcagtccagtcctggtggtcactcatcatgtagcagtcagcca
tcacctctcagcagcaccaacaacaacgacagtggggtagagatggccatgcacagtggg
ggcagttttggggacctgagtgcacaagatgggtgtcccttggttgactctactgttcct
gctgggggacaacagacagggatgggacttcagctgaggaaagcagtgagtcattgtggc
acagttaccatcaaaatggagactatcaagaaagaaaagctgaagacggtgagagactcc
tgcccgtgggtcaattcagcaccacagaccctacagggccaacgcaacaacactaagctg
cccccaatacctacagctggttccttgctggagaactccaacttaacaactaacctcaac
agtttacacaatggtcagcgattcggagaccagtctttgtgtgaagttactctgctaaac
caactaaatgatcggcgtaatagcacaaccagcacaatcagctcagcatacaccatgagt
cggcgctcatccggcatctcaccttgctactccagccgtcgctccagtgaggcatcccaa
tttggtgctaaccgtcataacaatatcagttcagcagactcctatgacccaatctccact
gatttatcccgacgctccagtgaggctagccattgcggaggtggtggtgctggtggagca
gggggaggaaatctcccaagccttctaagtctgaccccagctcagcattatcgtctaaag
gcaaaatatgctgctgccattggtggagcaccacctacgcccttacccaatatggagaga
atgagcctcaggacccgcatggccctctatagtgactctcaggaatattcaacacaccat
taccaccaaccactctctggaaatgtgccacggcgatgcagtgatactggatatggcaac
cacagcctgatgccccatgaggtacctgccaaccttccacgccgggccagtgacccagtg
cgctgtcccacccatgacactctttctacagttccacgctataacagtatgaacagcatg
aatagttcttcagaatgtcaccaagcattggcaatgtatggttacactcgttctgatggc
aacctgcagcgctacccgtttgcccccagaccaccaagcatttcagagaatgtagctatg
gagaacatggcagtagatgggatgggaaatgggggcgaacaggatgcggaagatgatata
gttcttccagatgacatggtgcaatacctgaggtcccaaaacccagggaaccaaggtcac
aacttgggacaagggaactaccaattcaataaccagtctcagggctatcagactggcagt
gccccgctcgcctcattttatttccagagaaggggtcctttgtttgatgcctgtttgatg
cagtctggtcaggatatgaatcatagtgagccccaagagcctttctcaacgtcatcacat
attaacaagaataatatgccagttcagtggaatgaggtgagttcaggaaccgtggacact
gcaacaaagctccccaaacagcaacattctctcaggggaaacctaactgttgttccacag
aggaacaattttgcttccttccaggcacaaggtcaaggccttggcagcaatcagcaagtt
gtaccaatgaatcagaatatgtataaacagggctatgcaaatcacaacaacaagaggctg
aacaacccccatcatcagcaaaaacagtgcagcactttgaaattgaatgatcaaagttct
gtacaagggtttagccaagacacaattcaaaattctatttctgcaagcaataatgtgcgt
gccactcggaataatgtgatggatcaaggagtgcaaagttatagaggaagggcacaacct
gatgaatattctcacataaaccatgtggtttatcagcaacagcactataatatttcatcc
cagcacaacaacatacagaatggtaccagtgtaatgttaccaccaagacccccagtagaa
cccaagccaggtggcaggcagcatcctgtttctggtatgatgcaattgaacagaataccc
aagttatctgatgtgagccccggtctgcgtaacaacacgtcagaggcaagtccaaaaagg
cccaatgggacggcgaccttacgaaacaactctgagaatcccaactctgcaatgttctac
acaggtgaaattcatttctttgaacaaacacctgcagcctttgaggcctcagtgtccccc
agtgtaagccagacccctgcaaataacaacatagcattaagtaacatggtctcaccagga
gtcaaccaggtctctagcagtacagtggattcttccacaggtagaaatggtggtgcggaa
cacacccaaatagattttgactcgatcttagatgatggggatcacgccagcctgatgtca
gggacccttagtcctggccttttgcagagcctctcccagaattcatctcgtctcaccacc
cctcgcaattctgttactctcgcatcggtaccagcaggaattggcaacatggccattggg
gatatgagctcaatgctcacagcactggctgaagaaagcaagttcctcaatatgattagt
tag
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integrated database retrieval system
