Syngnathus scovelli (Gulf pipefish): 125974820
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Entry
125974820 CDS
T08785
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137
Mitophagy - animal
sscv04140
Autophagy - animal
sscv04217
Necroptosis
sscv04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125974820 (sqstm1)
04137 Mitophagy - animal
125974820 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
125974820 (sqstm1)
04218 Cellular senescence
125974820 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125974820 (sqstm1)
03029 Mitochondrial biogenesis [BR:
sscv03029
]
125974820 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125974820 (sqstm1)
Membrane trafficking [BR:
sscv04131
]
Autophagy
Mitophagy
Cargo receptors
125974820 (sqstm1)
Pexophagy
125974820 (sqstm1)
Aggrephagy
125974820 (sqstm1)
Xenophagy
125974820 (sqstm1)
ER-phagy
ER-phagy recepters
125974820 (sqstm1)
Other autophagy associated proteins
Midbophagy
125974820 (sqstm1)
Mitochondrial biogenesis [BR:
sscv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
125974820 (sqstm1)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125974820 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
125974820
NCBI-ProteinID:
XP_049585660
LinkDB
All DBs
Position
1:29464234..29467198
Genome browser
AA seq
402 aa
AA seq
DB search
MSVTVKAYLLGKEESVREIRRFLVPRSEVQNFEHLCDKTCQMFSGLKKGAFNMYYKDCEE
DLVAFSSDDELSMGMACLKDDVFRVFIKEKKEHRRDFPVHAFPPGAFVAAAGPPPPPPHV
GAVHANVTCDGCEGPVAGVRFKCSVCPDYDLCSACQVQGKHTEHPLLPIWHPLQALFPRG
KLVKKMRHCSKNQKCARGGAPAAGLSFLKNVGEGVAAMLSPLGEPRIDVDIDVEHQGQRT
KVSNQDQGDVEVGGAEGDARPRKASADTTKEFDEEWTHVTCKEVDPSSGELQSLLQNDKL
DHDEKPNVDQNPKGDRSVKGNQKLDVPIVVQKDPSGLKVAALYPHLPPEADPRLVESLSH
MLSMGFTDEGGWLTRLLQAKDFDIGAALDAIQYAKKPRPHPH
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacggtgaaggcttaccttctgggcaaagaggagtcggttcgggagattcgt
cgcttcctggtgccgcgttctgaggtccaaaacttcgaacatctgtgcgacaaaacttgt
cagatgttctccggacttaagaagggtgctttcaacatgtactataaagactgcgaagaa
gacctggtggccttctcctcggatgacgagctctccatgggcatggcctgcttgaaggat
gacgtcttccgggttttcatcaaagagaagaaggagcaccgccgtgactttccagttcac
gcctttccaccgggcgcctttgtggcggcggcgggcccgccccctccgccaccccacgtg
ggcgctgtgcacgccaacgtgacgtgcgacggctgcgaggggccggtggcgggcgtccgc
ttcaagtgcagcgtgtgtcccgactacgacctttgctcggcttgtcaggtgcaagggaag
cacaccgagcaccccctgctgcccatctggcaccccctgcaggcactgttccctcgagga
aagctggtgaagaagatgcgccactgcagcaagaaccagaagtgtgccagaggtggcgcc
cccgctgcaggcctcagcttcctgaagaatgtgggagagggagtggcagccatgctgagc
ccgcttggtgagccacgcatcgacgtggacatcgacgtggagcaccagggccagaggacc
aaagtgagcaatcaggatcaaggggacgtggaggttggcggagctgagggcgacgctcgg
cccagaaaggcttcagccgacaccaccaaagagtttgacgaagagtggactcatgtcacg
tgcaaggaagtggacccttccagtggagaactgcagtccttactgcagaacgacaaactg
gaccacgacgagaaaccgaatgtggaccagaacccaaagggggaccggagtgtcaagggg
aaccagaagctggatgttcctatagtggtccagaaggatccatcaggcttgaaggtggca
gctctgtaccctcaccttcctccagaggcagatccccgcttggtggagtctctgagtcac
atgttgtccatggggttcaccgacgagggcggctggctgacccgcctcctgcaggctaaa
gattttgacatcggtgccgccctggacgccatccagtacgccaagaagccccgcccccac
ccgcactga
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