Syngnathus scovelli (Gulf pipefish): 125975637
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Entry
125975637 CDS
T08785
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310
Lysine degradation
sscv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125975637 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975637 (setdb1b)
Enzymes [BR:
sscv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
125975637 (setdb1b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125975637 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125975637 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Chromo_MORC2_6th
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
125975637
NCBI-ProteinID:
XP_049587385
LinkDB
All DBs
Position
9:12266858..12273911
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AA seq
1218 aa
AA seq
DB search
MDSGDRMQVEGWDQSMEEELGVSLDELKKWIDDMVEKSELVQKKRAQLSELTQWVEQKEE
EEAATEKLINEAKKSLVECEKLVRKTYQKNGLVYKSSSEDEDGGGGPPSGEVIEIEDDDD
DDDVIAVGCLVPPQNPVITVQEPMDTSNTLRKTAEQVNKLVQIVARPSQGAPLQRSAAQP
GTYSTPPAVIVSQIMAQPVGHVSLSPKKREDELQVGMNILGKKRMKTWHRGTLVAINPIG
THTFKYKVKFDKGKSLLSGNHVAFDYNPTLESLFVGARVVAKYKDSHQMWLYAGIVAEMP
TTKNQMRFLIFFDDGYASYVNLPDLFPICRPLKRTWEDIEDASCRDFIEEYITAYPSRPM
VLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMTT
ANTQEKKLAGQLRTRPNMGALRSKGPVVQYTSDGHVGATLIKPAPAPRQGTPPTPIQQSS
ATPSGGHLTHSPRIDGNKYQMAKKSTSPFVPGVGGTHASKVMQSLASSPSNAPKIISPVA
SATQVQLLPKPVSAPATPPVTAHPAATIPHQPSYRAPAERIFYMEHICQPACLNRVRPAR
RDMHRGKNPLLIPLLYDFRRMTGRRKVNRKMTFHVIYKAPCGLCLRNMAEIQRYLFQTTC
DFIFLEMFCLDPYVLVDRNFQPLRPFYYIPDITSGNEDIPLSCVNEIDSTPPPNVAYSKE
RIPEDGVFINTSLDFLVGCDCTDGCQDKSKCSCHQLTLQATGCTPGGQINPNAGFLYKRL
EECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVC
IYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRLK
IQPSALVSANTFGRQAKKAVDSSGSSEESNEEEDKESKSDESDSSDDTFVKDTYFSSSSV
WRSYTTRGQAKGHKEGSQDGKDGNTATATGDDKSLPVPEETGKSKVASWLTSQGLKKEPV
DVKSQVKAEAAKKQDVTTLSDSDDVQTISSGSDDNKDKDKVAPGVVKKQVAVKSTRGIAL
KTGHGMMVKTGAPGGGAPQGGPGAKSGQQGLTGGGGGDSGPRNTRLFFDGEESCYIIDAK
LEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVE
GKVLLCCCGSTECRGRLL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggactccggggacagaatgcaggtggagggctgggaccagagtatggaggaagagcta
ggtgtctctctggatgagctgaagaagtggattgacgacatggtggagaagagcgagctg
gtgcaaaagaaacgggctcagctcagcgagctgacgcagtgggtggagcaaaaggaggaa
gaggaggcagccacggagaagctcatcaacgaggccaagaagtcgctggtggaatgcgag
aagctggtgaggaaaacgtaccagaagaacggcctggtgtataagagcagctcggaagac
gaagacggtggcggcggcccgccgagcggtgaggtcatcgagatagaagacgatgatgac
gacgacgatgtcattgccgtcggctgcttggtcccaccacagaatcctgtcatcactgtc
caagagccaatggatacttccaacacactcaggaaaactgcagaacaggtcaacaagttg
gtgcaaattgtcgccaggccctcgcaaggggcacccttgcaaagatcagcagcacagcca
gggacttactccactccgccagccgtgattgtgtctcagataatggctcagcccgtgggc
cacgtcagcctcagccccaagaagagggaagatgagctgcaagtgggcatgaacattttg
ggcaagaaacgcatgaagacctggcacaggggcaccctggttgccatcaaccccatcggc
acccatacgttcaaatacaaagtgaagttcgataaaggcaagagtctgctctccggaaac
cacgtggccttcgactacaatcccaccctggagagtttgtttgtgggcgcccgcgtggtg
gccaagtacaaggacagccaccaaatgtggctgtatgccggcattgtggcggagatgccc
accaccaagaaccagatgaggttcttgatcttcttcgacgatggctacgcttcctatgtt
aacctgccggacctcttccccatctgcagaccattgaagcgcacgtgggaggacattgag
gacgcatcatgccgagacttcattgaggagtacatcacggcgtatcccagcaggcccatg
gtgctgctcaaagtcggccagatcatcaaaaccgagtgggagggaacctggtggaagagt
aaagtcgaggaagtggacggcagcttggtcaagatcctttttctggatgataagaggagt
gagtggatctaccgaggctccaccaggttggagcccatgttcaacttgaagatgaccacc
gccaacacgcaggagaagaagctggccggccagctgaggacacgacccaatatgggtgca
ttgcgaagtaaaggccccgtcgtccagtacaccagcgatggtcacgttggagccacgctc
atcaagccagcgccggccccacgccagggcacgccgccaactccaatccaacagtcgtcg
gccactccatccggtggccacctcacacactcgccacgcatcgatggtaacaaatatcag
atggccaagaagagcacatctccgtttgttccaggcgtaggcggcacccatgcctccaaa
gtcatgcagtcgctcgccagcagccccagcaacgcgccaaaaatcatcagtcccgtggcc
agcgccacccaggttcagttgctccccaagccggtgagcgcccctgccactccaccggta
acagcccacccggcggccaccatcccacaccagccgtcctaccgggcccctgccgagcgc
atcttctacatggagcacatatgtcagccggcctgcttgaaccgtgtccggccagccagg
cgagacatgcaccgaggcaagaaccctctcctcataccgctgctctacgacttcaggcgc
atgacgggccgacgcaaagtcaatcgcaagatgaccttccatgtgatctacaaggcccca
tgcggcctctgcctccgcaacatggccgagatccagcgctacctcttccagaccacctgc
gacttcatcttcttggagatgttctgtctggacccatacgtgctggtggaccgcaacttc
cagccgctcaggcccttctattacatcccggacatcaccagcggaaacgaggacatcccg
ctctcctgcgtcaacgagatcgattccacaccgcccccgaacgttgcctacagcaaagag
cgcattcctgaagacggtgtgttcatcaacacgagtctggacttcctggttggctgcgac
tgcaccgatggctgtcaggacaagtccaaatgttcctgccaccagctgacgctgcaggcg
accggttgcactccgggcggacagatcaacccaaatgctggatttttgtacaagcgtctg
gaggagtgcctccccacaggtatctacgagtgcaacaagcgctgtaagtgctgctctcaa
atgtgcaccaaccggctggtgcagcacggcctgcaggtgcgccttcagcttttcaagacc
caaaacaaaggctggggcatccgctgcttggacgacgtagccaagggctccttcgtctgc
atctatgccggtaaaatcctgacggacgactttgccgacaaagaaggcttggagatgggc
gatgagtattttgccaacctggaccatatagagagcgtggaaaacttcaaagagggctac
gagagcgaggcccactgctccgacagcgagggcagtggcgtggacgtgtcccggttgaaa
atccaaccgtctgccttggtgtccgccaacacctttggacggcaggccaagaaggctgtg
gacagctccgggtcatccgaagaaagcaacgaggaggaagataaagaatccaaaagtgac
gaaagcgacagttcggacgacacgtttgtcaaggacacctacttcagcagcagttctgtg
tggagaagctacaccacgcgcggacaagccaaaggccacaaggaagggagtcaagatggc
aaagatggaaacacggcgacggccacaggtgacgacaagtcgttgcctgtacccgaggag
acaggaaaaagcaaagtggcttcctggctcaccagtcagggactgaaaaaggagcctgtt
gacgttaagagtcaagtgaaggccgaagcggccaaaaagcaggacgtgaccacactctca
gacagtgacgacgtccagaccatcagctcaggatccgacgacaacaaggacaaagacaaa
gtagccccgggcgtggtcaagaagcaggtggctgtgaaatccactcgtggcatcgcgctc
aagaccggacacggcatgatggtgaagacaggcgcgcccggaggcggagcccctcagggc
gggccgggagccaagtcgggccagcagggcctgacgggcggcggtggcggcgacagcggg
cccagaaacacgcgactgtttttcgacggcgaagagtcgtgttacatcatcgacgccaag
ctggagggaaacctcggccgctatctcaatcacagctgcagtcccaacctgttcgtccag
aacgtctttgtggacacgcacgacttgaggttcccctgggtggctttttttgccagcaag
cgtatccgggcaggcacagagctgacgtgggattacaactacgaggtgggcagcgtggag
ggcaaagtgctgctgtgttgctgcggctccaccgagtgtcgaggaagactcttgtga
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integrated database retrieval system