KEGG   Syngnathus scovelli (Gulf pipefish): 125975637
Entry
125975637         CDS       T08785                                 
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
  KO
K11421  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00310  Lysine degradation
sscv01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    125975637 (setdb1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sscv03036]
    125975637 (setdb1b)
Enzymes [BR:sscv01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.366  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
     125975637 (setdb1b)
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     125975637 (setdb1b)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125975637 (setdb1b)
SSDB
Motif
Pfam: Tudor_4 Tudor_5 DUF5604 SET MBD Pre-SET Chromo_MORC2_6th 53-BP1_Tudor
Other DBs
NCBI-GeneID: 125975637
NCBI-ProteinID: XP_049587385
LinkDB
Position
9:12266858..12273911
AA seq 1218 aa
MDSGDRMQVEGWDQSMEEELGVSLDELKKWIDDMVEKSELVQKKRAQLSELTQWVEQKEE
EEAATEKLINEAKKSLVECEKLVRKTYQKNGLVYKSSSEDEDGGGGPPSGEVIEIEDDDD
DDDVIAVGCLVPPQNPVITVQEPMDTSNTLRKTAEQVNKLVQIVARPSQGAPLQRSAAQP
GTYSTPPAVIVSQIMAQPVGHVSLSPKKREDELQVGMNILGKKRMKTWHRGTLVAINPIG
THTFKYKVKFDKGKSLLSGNHVAFDYNPTLESLFVGARVVAKYKDSHQMWLYAGIVAEMP
TTKNQMRFLIFFDDGYASYVNLPDLFPICRPLKRTWEDIEDASCRDFIEEYITAYPSRPM
VLLKVGQIIKTEWEGTWWKSKVEEVDGSLVKILFLDDKRSEWIYRGSTRLEPMFNLKMTT
ANTQEKKLAGQLRTRPNMGALRSKGPVVQYTSDGHVGATLIKPAPAPRQGTPPTPIQQSS
ATPSGGHLTHSPRIDGNKYQMAKKSTSPFVPGVGGTHASKVMQSLASSPSNAPKIISPVA
SATQVQLLPKPVSAPATPPVTAHPAATIPHQPSYRAPAERIFYMEHICQPACLNRVRPAR
RDMHRGKNPLLIPLLYDFRRMTGRRKVNRKMTFHVIYKAPCGLCLRNMAEIQRYLFQTTC
DFIFLEMFCLDPYVLVDRNFQPLRPFYYIPDITSGNEDIPLSCVNEIDSTPPPNVAYSKE
RIPEDGVFINTSLDFLVGCDCTDGCQDKSKCSCHQLTLQATGCTPGGQINPNAGFLYKRL
EECLPTGIYECNKRCKCCSQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVC
IYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDVSRLK
IQPSALVSANTFGRQAKKAVDSSGSSEESNEEEDKESKSDESDSSDDTFVKDTYFSSSSV
WRSYTTRGQAKGHKEGSQDGKDGNTATATGDDKSLPVPEETGKSKVASWLTSQGLKKEPV
DVKSQVKAEAAKKQDVTTLSDSDDVQTISSGSDDNKDKDKVAPGVVKKQVAVKSTRGIAL
KTGHGMMVKTGAPGGGAPQGGPGAKSGQQGLTGGGGGDSGPRNTRLFFDGEESCYIIDAK
LEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVE
GKVLLCCCGSTECRGRLL
NT seq 3657 nt   +upstreamnt  +downstreamnt
atggactccggggacagaatgcaggtggagggctgggaccagagtatggaggaagagcta
ggtgtctctctggatgagctgaagaagtggattgacgacatggtggagaagagcgagctg
gtgcaaaagaaacgggctcagctcagcgagctgacgcagtgggtggagcaaaaggaggaa
gaggaggcagccacggagaagctcatcaacgaggccaagaagtcgctggtggaatgcgag
aagctggtgaggaaaacgtaccagaagaacggcctggtgtataagagcagctcggaagac
gaagacggtggcggcggcccgccgagcggtgaggtcatcgagatagaagacgatgatgac
gacgacgatgtcattgccgtcggctgcttggtcccaccacagaatcctgtcatcactgtc
caagagccaatggatacttccaacacactcaggaaaactgcagaacaggtcaacaagttg
gtgcaaattgtcgccaggccctcgcaaggggcacccttgcaaagatcagcagcacagcca
gggacttactccactccgccagccgtgattgtgtctcagataatggctcagcccgtgggc
cacgtcagcctcagccccaagaagagggaagatgagctgcaagtgggcatgaacattttg
ggcaagaaacgcatgaagacctggcacaggggcaccctggttgccatcaaccccatcggc
acccatacgttcaaatacaaagtgaagttcgataaaggcaagagtctgctctccggaaac
cacgtggccttcgactacaatcccaccctggagagtttgtttgtgggcgcccgcgtggtg
gccaagtacaaggacagccaccaaatgtggctgtatgccggcattgtggcggagatgccc
accaccaagaaccagatgaggttcttgatcttcttcgacgatggctacgcttcctatgtt
aacctgccggacctcttccccatctgcagaccattgaagcgcacgtgggaggacattgag
gacgcatcatgccgagacttcattgaggagtacatcacggcgtatcccagcaggcccatg
gtgctgctcaaagtcggccagatcatcaaaaccgagtgggagggaacctggtggaagagt
aaagtcgaggaagtggacggcagcttggtcaagatcctttttctggatgataagaggagt
gagtggatctaccgaggctccaccaggttggagcccatgttcaacttgaagatgaccacc
gccaacacgcaggagaagaagctggccggccagctgaggacacgacccaatatgggtgca
ttgcgaagtaaaggccccgtcgtccagtacaccagcgatggtcacgttggagccacgctc
atcaagccagcgccggccccacgccagggcacgccgccaactccaatccaacagtcgtcg
gccactccatccggtggccacctcacacactcgccacgcatcgatggtaacaaatatcag
atggccaagaagagcacatctccgtttgttccaggcgtaggcggcacccatgcctccaaa
gtcatgcagtcgctcgccagcagccccagcaacgcgccaaaaatcatcagtcccgtggcc
agcgccacccaggttcagttgctccccaagccggtgagcgcccctgccactccaccggta
acagcccacccggcggccaccatcccacaccagccgtcctaccgggcccctgccgagcgc
atcttctacatggagcacatatgtcagccggcctgcttgaaccgtgtccggccagccagg
cgagacatgcaccgaggcaagaaccctctcctcataccgctgctctacgacttcaggcgc
atgacgggccgacgcaaagtcaatcgcaagatgaccttccatgtgatctacaaggcccca
tgcggcctctgcctccgcaacatggccgagatccagcgctacctcttccagaccacctgc
gacttcatcttcttggagatgttctgtctggacccatacgtgctggtggaccgcaacttc
cagccgctcaggcccttctattacatcccggacatcaccagcggaaacgaggacatcccg
ctctcctgcgtcaacgagatcgattccacaccgcccccgaacgttgcctacagcaaagag
cgcattcctgaagacggtgtgttcatcaacacgagtctggacttcctggttggctgcgac
tgcaccgatggctgtcaggacaagtccaaatgttcctgccaccagctgacgctgcaggcg
accggttgcactccgggcggacagatcaacccaaatgctggatttttgtacaagcgtctg
gaggagtgcctccccacaggtatctacgagtgcaacaagcgctgtaagtgctgctctcaa
atgtgcaccaaccggctggtgcagcacggcctgcaggtgcgccttcagcttttcaagacc
caaaacaaaggctggggcatccgctgcttggacgacgtagccaagggctccttcgtctgc
atctatgccggtaaaatcctgacggacgactttgccgacaaagaaggcttggagatgggc
gatgagtattttgccaacctggaccatatagagagcgtggaaaacttcaaagagggctac
gagagcgaggcccactgctccgacagcgagggcagtggcgtggacgtgtcccggttgaaa
atccaaccgtctgccttggtgtccgccaacacctttggacggcaggccaagaaggctgtg
gacagctccgggtcatccgaagaaagcaacgaggaggaagataaagaatccaaaagtgac
gaaagcgacagttcggacgacacgtttgtcaaggacacctacttcagcagcagttctgtg
tggagaagctacaccacgcgcggacaagccaaaggccacaaggaagggagtcaagatggc
aaagatggaaacacggcgacggccacaggtgacgacaagtcgttgcctgtacccgaggag
acaggaaaaagcaaagtggcttcctggctcaccagtcagggactgaaaaaggagcctgtt
gacgttaagagtcaagtgaaggccgaagcggccaaaaagcaggacgtgaccacactctca
gacagtgacgacgtccagaccatcagctcaggatccgacgacaacaaggacaaagacaaa
gtagccccgggcgtggtcaagaagcaggtggctgtgaaatccactcgtggcatcgcgctc
aagaccggacacggcatgatggtgaagacaggcgcgcccggaggcggagcccctcagggc
gggccgggagccaagtcgggccagcagggcctgacgggcggcggtggcggcgacagcggg
cccagaaacacgcgactgtttttcgacggcgaagagtcgtgttacatcatcgacgccaag
ctggagggaaacctcggccgctatctcaatcacagctgcagtcccaacctgttcgtccag
aacgtctttgtggacacgcacgacttgaggttcccctgggtggctttttttgccagcaag
cgtatccgggcaggcacagagctgacgtgggattacaactacgaggtgggcagcgtggag
ggcaaagtgctgctgtgttgctgcggctccaccgagtgtcgaggaagactcttgtga

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