Syngnathus scovelli (Gulf pipefish): 125975664
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Entry
125975664 CDS
T08785
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125975664 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125975664 (phc1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
125975664 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
Motif
Other DBs
NCBI-GeneID:
125975664
NCBI-ProteinID:
XP_049587456
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Position
9:11576991..11582984
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AA seq
774 aa
AA seq
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MDASEDQNTGTSTNNSNTTTTTTGTSSTTNGNPQTSRTSRPPQIAHMSLYERQAVQALQA
LQRQPNAAQYFQQLMLQQQINNAQLHNLAAVQQATLAASRQSNTPSSSISQATTTVNLST
TSAGGASVTPRPHGTATSATTTALNQSVLLGGNTPGQGQMYLRVNRSLRAPLASQLIFMP
GGTATATVATVAQTQQQQKQQTEAPTSANAQPESDQVQNLALHCVSTPRALAIKSEVPDR
KEPGAFPLSQAAKSSGNAIAVKGSTQLAMAAPAASVAPSASPSLPLSQLLLSPSAAPVIL
VPTSNVPTTTQGYSISSVAPKANVNTQTLVVQPLQQAAPAADKGPVPIQPKMAHGHRLPM
QVSPRQPLPILPAPPGNNQAAHNHPHIPVQLVGARQCMAGGVQAVALAQVRNVAAQENMN
GVSHNTSAPVNKSVNGSLKRKSDCEAANETTAVSSESAPNKDATPALIPAPTKESATPPS
AASFPLAPSLPLPLSRGIHGDKERAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVAGLLK
DRDFALGARAENGPPLLKCEYCSSLAPANQFRGTKRFCSNTCAKRYNISFRKRYKSSRGR
SDNATPVPALATTENAARRRGPPRRSSSNGSKLSSQHLNVKCRSDSSRSEDASSDGDEEE
EDTPSLSPSSSHSRSCSRAEQDNAPQSDAASAPGSLPMETAGFLSATPAQWSVEEVCRFI
SSLQGCEELAAHFLSQEIDGQALLLLREDHLISTMNIKLGPALKICASINSLRE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtgaggaccaaaacaccggcaccagcacaaacaacagcaacaccaccacc
actaccaccggcaccagcagcaccaccaatggaaaccctcaaacaagcagaacctcccgc
ccgccgcagatagcccacatgtctctctacgagcgacaggctgtgcaggctctccaagcc
ttgcagagacagccgaacgcggcgcagtacttccagcaactcatgctacagcagcagatc
aacaacgctcaactgcataacctagccgctgtgcaacaggctacactcgccgcaagccgc
cagtccaacacgccgagtagcagcatctcccaggctaccaccactgtgaatctcagtact
acgtcagcggggggagccagcgtaactccccgtccccacgggacagccacctccgcgaca
acaactgccctcaaccagtcagtgttgttgggggggaacacgccaggacaggggcagatg
tatcttcgggtgaaccgttccctcagggctcctctggcctcacagctcatcttcatgcct
gggggcacagcaacagctaccgtggcaacagtggcccagacccagcagcaacagaagcag
cagaccgaagctcctacctcagccaacgctcagccagaaagtgatcaggtgcagaatttg
gccctacactgtgtgtccactcccagagcactcgccatcaagtcagaggtccctgacaga
aaagagccgggcgcctttcccctcagtcaagcggccaaatcgtcgggcaacgcgatcgcc
gtcaaaggttccacccagctggcaatggccgctcccgcagcctcggtggcgccctccgcc
tccccatcgctccccctttcccaactcctcctgtcgccctcggccgctcccgtcatcctg
gtgcccacctccaacgtgcccaccaccacccagggctactccatcagctcggtggcgccc
aaagccaacgtcaacactcagacactggtggtgcagcccctccagcaggccgcccccgcc
gcagacaaaggtcctgtgcccatccagcccaagatggcgcacggacaccgcttacccatg
caggtttccccccgccagccgctcccaattctcccggcgccgcccggcaacaaccaagcg
gcccacaaccatccgcacattcccgtgcagctggtgggggcccggcagtgcatggcgggc
ggcgtgcaggctgtggccctggcgcaggtgcgaaacgtggcagcccaggagaacatgaac
ggcgtctcacacaacacttccgcacctgtgaacaagtccgtcaatggctccctgaagaga
aagtcagactgtgaagcggccaacgagacgacggcggtatcttcagaatctgctcccaat
aaggacgccactcctgctttaattccagcacccacaaaggaatccgcaactcccccttcc
gcagcctccttcccgttggcgcccagcctgcctctgccgctgtcgaggggcatccacggc
gacaaagagcgggcgccgctcccccaggccgtggtcaagccgcaagtcctcacccacctc
atcgagggcttcgtcatccaggagggagccgagcctttccctgtcgcagggctcctcaaa
gatcgggactttgcactgggcgcccgcgccgaaaacggcccacctttattgaagtgtgag
tactgctcgagcctggcgccagccaaccagttccgagggaccaagaggttctgttccaac
acctgcgcaaagaggtacaacataagcttccgaaaacgctacaagtcgagcagaggacga
agcgacaacgcgacgccggtgcctgctctggccacgactgagaatgcggccaggcgccgc
gggccccctcgccgcagcagctccaacggcagcaagttgtccagccagcatctaaacgtt
aagtgccgctccgactccagccgctcggaggacgcatccagcgacggggacgaggaggaa
gaggacacaccgtctctttctcccagctcctctcactcgcgctcgtgctccagagccgag
caggacaacgctccccagtcggacgccgcctcggctcccgggagcctccccatggagacg
gccggcttcctgtcggccactccggcccagtggagcgtggaggaagtctgcaggttcatc
tcgtcgcttcaaggctgcgaggagctggccgctcacttcttgtcgcaggaaatcgacggg
caggcgctactgcttctccgagaggaccatctcatctccaccatgaacatcaagttggga
cccgccctcaagatctgtgcctctatcaacagcctgcgcgagtga
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