Syngnathus scovelli (Gulf pipefish): 125975753
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Entry
125975753 CDS
T08785
Symbol
tnfrsf1a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04010
MAPK signaling pathway
sscv04060
Cytokine-cytokine receptor interaction
sscv04150
mTOR signaling pathway
sscv04210
Apoptosis
sscv04217
Necroptosis
sscv04920
Adipocytokine signaling pathway
sscv05132
Salmonella infection
sscv05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125975753 (tnfrsf1a)
04150 mTOR signaling pathway
125975753 (tnfrsf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125975753 (tnfrsf1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125975753 (tnfrsf1a)
04217 Necroptosis
125975753 (tnfrsf1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125975753 (tnfrsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125975753 (tnfrsf1a)
09171 Infectious disease: bacterial
05132 Salmonella infection
125975753 (tnfrsf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
sscv04050
]
125975753 (tnfrsf1a)
04090 CD molecules [BR:
sscv04090
]
125975753 (tnfrsf1a)
Cytokine receptors [BR:
sscv04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
125975753 (tnfrsf1a)
CD molecules [BR:
sscv04090
]
Proteins
125975753 (tnfrsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF2232
DUF6476
SerK_C
Baculo_11_kDa
Beta-lactamase2
Motif
Other DBs
NCBI-GeneID:
125975753
NCBI-ProteinID:
XP_049587695
LinkDB
All DBs
Position
9:11707917..11715577
Genome browser
AA seq
383 aa
AA seq
DB search
MATLGVLLLLACVFTPTSALIPTSRERECPFGDYLYNGICCNKCPPGMKLAEKCLREGER
SKCTPCPPNQYSDRLNFHPNCKPCKSCNKKKHEVQVSECERERNTLCRCEDGFYIFAIDS
ETTECLKCTPCGLNEREVQKCTAERNTVCECKENFYRVKRKCEPCKSCAADCKHLCKSLP
SHNSGDSEESGNGYIVQVLTGVVVVAMTLLMLLIIYMVTKRFTKKSGLKLPSQISETSAE
LSEALFQNGDVSVIAVIDCPGSTMLGKANSKLPDCVPLEIKTHDLIYTLLDLVPVTQVKQ
LVRSLGVTETIIERAELDFRASKEAHYQMLKAWTEMGSQPSGGGGGGRGGMLHSALLQEL
LLKLRHMHLGGVAEELETKYTIH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggccacccttggcgtcctcctgctgttggcgtgtgtattcacacccacgtcggcactg
attcccactagcagggagagggagtgtcccttcggagactatctttataatgggatttgc
tgcaacaaatgtccacctggtatgaaactcgcagaaaagtgcctgcgcgagggggagagg
agtaagtgcacgccatgtcctcctaaccagtattcggaccgattgaacttccaccccaac
tgcaagccatgcaaatcctgcaacaagaagaagcatgaagtgcaagtctccgaatgcgaa
agggaacgaaacacgctgtgccgctgcgaggacggcttctacatctttgccatcgactcg
gagaccactgagtgccttaagtgcacgccgtgcggcctgaatgagagggaagtccaaaaa
tgtacggcggagaggaatactgtctgcgagtgcaaagagaacttctacagagtgaagagg
aagtgcgagccatgcaagagttgcgcagccgattgcaaacatctctgcaagtcgcttcct
tcccacaattcaggggattctgaggagagcggaaatggatatattgttcaggtcctgacc
ggagtggtggttgtggccatgacgctgttgatgctgctcatcatttacatggtcaccaag
cgcttcaccaaaaaatcaggactcaaattgccgtcccaaatatcagagacgtcggcagag
ttgtctgaggccctgtttcagaatggtgacgtatctgtcatagcagtgattgattgtcct
gggagcacaatgcttggcaaggcaaattccaaactgcccgactgtgtcccgctggagatc
aagacccacgacctcatctacacgctgctcgacttggttcccgtcacgcaggtcaagcag
ctggtgcgttccctcggcgtgaccgagacaatcatcgaacgggccgagctggacttccgc
gccagcaaggaggctcactaccagatgctgaaagcctggacggaaatgggctcgcagcct
tccggcggtggcggaggaggtcggggcggaatgttgcactctgctttgctacaggagctt
ttgctcaaattgagacacatgcacctcggaggggtggcggaggagctggagacaaagtac
accattcactaa
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