Syngnathus scovelli (Gulf pipefish): 125977040
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Entry
125977040 CDS
T08785
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04144
Endocytosis
sscv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125977040
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125977040
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125977040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125977040
04121 Ubiquitin system [BR:
sscv04121
]
125977040
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125977040
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125977040
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125977040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
125977040
NCBI-ProteinID:
XP_049589123
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Position
11:complement(670519..679442)
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AA seq
864 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKRTEKCNNTHSPKWKQAVTVIVTP
VSKLIFRVWSHQTLKADILLGMATLEICDTLKANELKLREVVQTLQLCSDRDSRDIVGDL
SVCLDGMHVDPEAFSAAERDHASILNDGARPNGNRASRDASPSSDLDEWVIVPDARTVNG
ANSPSRSPGGSGGSFRSRLARPSSAPGRSAISPSTSSSSSSPSEMSEGPATDASSQASTS
GGLDQQVDSGSSAAGAIARPPAESGPKPAALAAPSTAAPRVSPMSSGPLPQGWEQRMTQN
GRMYFVDHIEKRTTWERPESLPTGWERRVDPMGRVYFVDHITRTTTWQRPTQESVRNYEE
WQHQRSQLQGAMQQFNQRFIYGIQDQLAATSNKEFDPLGPLPRGWEKRTDTNGRVYFVHH
PTRTTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGKSSLENG
PQITYVRDFKAKVQYFRFWCQQLSMPQYIKISVSRKTLFEDSFQQIMSFHPQDLRRRLYI
IFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFK
FIGRLIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESVDPEFYNSLIWIKDNNIEEC
GLEMFFSVDKEILGEVTTHELKPDGGNVQVTEENKEEYIRLVAEWRLSRGVEEQTQAFFE
GFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRNTIYKNYARTSKQICWFWQFAKEM
DNEKRMRLLQFVTGTCRLPLGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPP
YKSYEQLKEKLMLAIEETEGFGQE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaattacaagtcacagtgctttctgccaaactcaaggaaaacaaaaagaac
tggttcggtcccagtccgtacgtcgaggtagccgtggacggccaatccaagcggacagaa
aagtgcaacaatacgcatagtccaaaatggaagcaggctgtcaccgttatcgtgacacct
gtcagcaagctgatattccgcgtgtggagccaccagacactgaaggcggacatcttgttg
ggaatggctacgctggagatctgtgacaccctgaaggccaacgagctgaaattgcgcgag
gtggtccagacgctgcagctgtgttctgacagagattcccgagatatcgtcggcgacctg
tctgtctgtctggatggcatgcatgtggacccggaagccttttccgcagcagagagagac
catgcttcaatcctaaacgatggtgccagaccaaatggcaacagggcaagcagagacgcg
tcgccctccagtgacttggatgagtgggtcatcgtgcccgacgctcgcactgtcaatggc
gcaaactccccttcccgttctccaggcggatccggcgggtcttttcgctctcgattggcc
cggccttcttctgcgcctggtagatctgccatctcaccaagtacttcctccagcagctcc
tcccctagcgagatgagcgagggtccggcaactgacgcctcctcccaggcatccaccagt
gggggtttggatcagcaggtggattctgggtcatctgcagccggagctatagccaggccc
ccagcggagagtggccccaagccagcggccctggcagcaccttccacagccgctccgaga
gtctcgccgatgagcagcgggcccttgccgcaaggttgggagcagcgaatgacccagaat
ggacgcatgtactttgtcgatcacatcgagaagagaacaacctgggaacggccagagtcg
ctgcctacagggtgggagcgcagggtagatcccatgggccgcgtctactttgtcgaccac
atcaccaggaccaccacttggcagcgccccacgcaggagtctgtacgcaactacgaggag
tggcagcatcaacgcagtcagctgcagggagccatgcagcagttcaaccagaggttcatc
tacgggattcaggaccagttggcggccacctctaacaaagagtttgatccactgggtcct
cttccacgtggctgggaaaagagaacggacacaaatggcagggtgtattttgtccatcac
ccgacccgaacgacccaatgggaagaccccaggacacaagggctgctgaatgataagcct
ttgcctgagggctgggagatgaggttcaccgtggacggcatcccctactttgtggatcac
aaccggcgaaccaccacctacattgaccctcgcacgggcaaatcctcgcttgaaaacgga
ccgcagattacctacgtcagggatttcaaagccaaagtgcaatacttcaggttctggtgt
cagcaactgtcaatgcctcagtacattaagatttctgtgtccaggaaaaccttgtttgag
gactcattccaacagatcatgagcttccaccctcaagatctgagacggagactgtatatc
atttttcctggggaggaaggtttggactatggcggtgtagccagggaatggtttttcttg
ctctctcatgaagtgctcaaccccatgtactgccttttcgagtacgccggcaaggataac
tactgtctgcaaatcaaccccgcctcctacatcaacccggaccacctcaagtacttcaag
ttcatcgggcgcttgatcgccatggctttgttccatggcaagttcatcgacacgggtttc
tcgttgcccttctacaagcgcatcctgaacaagcctctggccctcaaagacttggagtct
gtggatcccgagttttacaactctctgatatggatcaaggataacaacatagaagagtgc
ggtctggagatgttcttctccgtcgacaaagagatcctgggagaggtgaccacgcacgag
ctcaaaccggatggtggcaacgttcaagtgactgaggaaaacaaggaggagtacatcagg
ttggtggccgagtggaggctgtccagaggtgtggaggagcagacccaggccttctttgag
ggcttcaacgaagttctgccgcagcagtaccttcaatactttgacgctaaggaactagag
gtgatgctgtgtggcatgcaggagattgacctggtggactggcagaggaacaccatctac
aagaattacgctcggacaagcaagcaaatatgttggttctggcagtttgcaaaggagatg
gacaatgagaagaggatgcgactgctgcagtttgtaacgggaacatgtcgccttcccctc
ggcggctttgctgacctcatgggaagcaacggcccgcagaagttctgcattgaaaaggtg
ggaaaagagaactggcttccgcgaagccacacatgctttaatcgtctggacttgcctccg
tacaagagctacgagcaacttaaggagaagctcatgctcgccatcgaagagactgaaggt
ttcgggcaggagtaa
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